Clostridium perfringens ATCC 13124: CPF_1017
Help
Entry
CPF_1017 CDS
T00378
Symbol
dcm
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00270
Cysteine and methionine metabolism
cpf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CPF_1017 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpf03000
]
CPF_1017 (dcm)
03032 DNA replication proteins [BR:
cpf03032
]
CPF_1017 (dcm)
03036 Chromosome and associated proteins [BR:
cpf03036
]
CPF_1017 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
cpf02048
]
CPF_1017 (dcm)
Enzymes [BR:
cpf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
CPF_1017 (dcm)
Transcription factors [BR:
cpf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
CPF_1017 (dcm)
DNA replication proteins [BR:
cpf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
CPF_1017 (dcm)
Chromosome and associated proteins [BR:
cpf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
CPF_1017 (dcm)
Prokaryotic defense system [BR:
cpf02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
CPF_1017 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ABG83927
UniProt:
A0A0H2YTQ3
LinkDB
All DBs
Position
1168761..1169984
Genome browser
AA seq
407 aa
AA seq
DB search
MAIEKTVCELFAGVGGFHLGLSKASADWEVLWANQWEPSRKVQHAFECYAKHFPKTNAVN
EDIALVNENPEAFGLPKYNLLVGGFPCQDYSVAATKSKGIEGKKGVLWWEIRKFLERDMP
PFVLLENVDRLLKSPAKQRGRDFGVMLTCFRDLGYNVEWRVINAADYGFSQRRRRVFIFA
YKHDTNYCERVTQGLENEGFMEAYIKENGFFAEPFPIETIYGEDEKVLNQDILEVSDHFS
FGFQESGALINDRIYTTRYTPQSQEPVTLGEILQKDVSEEFYLGEELDRWTYMKGAKAEP
RTTKEGFEYIYREGAVGFPDSLELPARTMLTSEASVNRSTHVVKDPQTNRLRVLTPVECE
RLNGFDDEWTNTGMTQKFRYFCMGNALVVGLIERMGRKLDRIFELEE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagaaaaaactgtatgtgaactgtttgcaggtgttggtggattccaccttgga
ttaagtaaagcatcagcagactgggaggttctttgggcgaatcaatgggaaccttcaaga
aaggtacagcatgcatttgagtgttatgcaaagcattttccaaagacaaatgctgttaat
gaagatatagctttagtaaatgaaaatccagaggcttttggacttccaaagtataattta
cttgtaggtggttttccatgccaagattattcagtagctgctacgaagtcaaaaggaata
gaagggaaaaaaggagttttatggtgggagataagaaagtttctagaaagagacatgcca
ccatttgtacttttagagaatgttgatagattactaaaatctcctgcaaagcaaagggga
agagattttggagtaatgttaacttgttttagagatttaggatacaatgttgagtggaga
gttataaatgcggcagattatggattctctcaaagaagaagaagagtatttatatttgct
tataaacatgatactaattattgtgaaagagtaactcaaggattagaaaatgagggattc
atggaagcttatataaaagaaaatggattctttgcagaaccatttcctatagaaactata
tatggtgaagatgaaaaagtattaaatcaagatatacttgaggtatcagatcatttttca
tttggtttccaagaatcaggagcattaataaatgatagaatttatacaactagatataca
ccacaaagtcaagaaccagttacacttggtgaaatacttcaaaaggatgtaagtgaagag
ttttatttaggtgaagaattagatagatggacttatatgaagggtgctaaggcagagcct
agaacaactaaagaaggctttgagtatatctatagagagggagctgttggatttccagat
agtttagagttacctgcaagaacaatgcttacaagtgaagctagtgtaaatagaagtact
catgtagtaaaggatccacaaactaatagattaagagtattaacaccagtagagtgtgaa
agattaaatggctttgatgatgaatggactaatacaggaatgactcagaagtttagatat
ttttgtatgggaaatgcattggttgttggattaattgaaagaatgggtagaaaattagat
agaatatttgaattagaagagtaa
DBGET
integrated database retrieval system
