Clostridium perfringens ATCC 13124: CPF_1103
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Entry
CPF_1103 CDS
T00378
Name
(GenBank) glycosyl hydrolase, family 20
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00511
Other glycan degradation
cpf00520
Amino sugar and nucleotide sugar metabolism
cpf00600
Sphingolipid metabolism
cpf01100
Metabolic pathways
cpf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
CPF_1103
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CPF_1103
00511 Other glycan degradation
CPF_1103
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CPF_1103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cpf03110
]
CPF_1103
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
CPF_1103
Chaperones and folding catalysts [BR:
cpf03110
]
Intramolecular chaperones
Others
CPF_1103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_H_20C_C
Glyco_hydro_20
GcnA_N
Motif
Other DBs
NCBI-ProteinID:
ABG83419
UniProt:
A0A0H2YSH1
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Position
1259269..1261191
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AA seq
640 aa
AA seq
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MRVKLVGLNEEMLEAVNGLEELIDFQLYNEKGSNNENLEIINVSKLPEESENVIEVLRGK
NNEIRYKKKHHFFRAFSLYLQFLKKGEESFRKSEKSYIDSVGAMIDASRNAVYRVSEVKK
ILGYMALMGHNRCMLYTEDTYEIEGYPYFGYMRGRYTKEELREIDDYGYSLGIEVVPCIQ
TLAHLKQTLRWPYGEGVKDTQDVLLVGEEKTYKFIEAMISSLRECFRSKNIHIGMDEAFD
LGRGHYLTKHGHVPHQELMVEHLNKVNEIAKKYDFKPMIWDDMFLRCGAPDGGYYDLDIV
ITPEIANNIPEEVSLVYWDYYNSDEEKYKKLLDIRDDFNNNIIFAGGCWRWSGFAPNYSK
TFETTNAALNQCKAKGIKEVFATAWGDDGSETPIYSIIVGLILFGEHGYYNKVEKEWIDE
RCKSLTGLSMEDFTSLEELDLVPSVKIPNMEVCNPSKYIAYQDLLLGAFDKHLEGLDLEE
HYINLSKKYEEIGEKSERFKLMFTMYSKLAAYLSVKSEIGLEIRKAYLEKDKDALRLIAY
NFIPEIQEKLKSFHKSFRDLWYKECKGQGFEVMDIRLGGVMARCDSAMYRIKAYLKGNID
KIEELEEERLYFSEHFGGDDCKLICCNEYQKIATQNILSW
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagagttaaattagttggattaaatgaggaaatgttagaagctgtcaatggattagaa
gaactaattgattttcagctttataatgagaaggggagtaataatgaaaatttagaaatt
ataaatgtttctaagcttcctgaagaatcagaaaatgtaatagaagtccttagaggaaaa
aataatgaaataagatataagaaaaaacatcacttttttagggcatttagtttatatctt
caatttcttaaaaagggagaggagagttttagaaaaagtgaaaaaagttatattgattca
gtaggagcaatgatagatgcctcaagaaatgctgtctatagagtttctgaggttaaaaag
atattaggatatatggcattaatgggacataataggtgtatgctttatactgaagatact
tatgagattgagggttatccatactttggttatatgagaggaagatataccaaagaggaa
ttaagggaaattgatgattatggatactctttaggtatagaggttgtaccttgtattcaa
actttagctcacttaaaacaaactttaagatggccttatggggaaggggtgaaagacact
caagatgtacttttagtaggagaggaaaagacttataagtttatagaggcaatgatttct
tctttaagagagtgctttagaagtaaaaatattcatataggtatggatgaggcttttgat
ttaggaagaggccattatttaactaaacatggacatgttcctcaccaagagctcatggta
gagcatttaaataaggttaatgaaatagcaaaaaaatatgattttaagccaatgatttgg
gatgatatgtttttaagatgtggagctccagatggtggatattacgatttagatatagtt
ataactcctgaaatagcaaataatattccagaggaagtttccttagtttattgggattat
tataattctgatgaagaaaaatataagaagcttttagatattagagatgattttaataat
aatattatctttgcaggaggatgctggaggtggagtggatttgctccaaactattcaaag
acctttgaaacaacaaatgctgccttaaatcaatgtaaggctaaaggaataaaagaagtc
tttgcaacggcttggggagatgatggatcagaaacgccaatatattcaataatagtaggt
cttatattatttggagagcatggctattataacaaggtagagaaagaatggatagatgaa
agatgcaaatctttaacagggcttagcatggaggactttacttctttagaagaattagat
cttgttccatcagttaaaattcctaatatggaggtttgtaatccttcaaaatatatagct
taccaagatttgcttttaggagcctttgataagcatttagaggggctagacttagaagaa
cattatattaatctttctaaaaaatatgaggaaataggagagaaaagtgagaggtttaaa
ttaatgtttactatgtattctaaacttgctgcttacctttcagttaaaagtgaaatagga
ttagaaataagaaaagcttatctagaaaaggataaggatgcattaaggcttatagcatat
aactttattccagaaatacaagaaaagctaaagagttttcataagagttttagggatcta
tggtataaagaatgtaaaggacaaggctttgaagttatggatattagacttggtggagtt
atggcaagatgcgattctgctatgtatagaataaaagcttatcttaaaggaaatattgat
aaaatagaagagctagaagaggaaagactttatttttctgaacattttgggggagatgat
tgtaagcttatatgttgcaatgaatatcaaaaaatagcaacacaaaatattttaagttgg
taa
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