Clostridium perfringens ATCC 13124: CPF_1202
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Entry
CPF_1202 CDS
T00378
Name
(GenBank) collagen triple helix repeat protein
Organism
cpf
Clostridium perfringens ATCC 13124
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Gene cluster
GFIT
Motif
Pfam:
Collagen
BclA_C
C1q
Motif
Other DBs
NCBI-ProteinID:
ABG82953
UniProt:
A0A0H2YPV3
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All DBs
Position
complement(1367043..1368245)
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AA seq
400 aa
AA seq
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MIRKIYNPNRYYDDYNRYNCYDRYNCYDDEYCQDDYYCKEDCYCKDDCYLEINCNCCDCC
KPGPRGPRGPQGPRGPQGPRGPMGCQGERGPIGPMGPMGPIGPQGPQGDQGLTGPQGPAG
PQGEQGPQGDQGPVGPIGPQGPQGEQGLTGPQGPAGSQGPEGPTGPQGATGPQGPEGPTG
AQGDQGPVGPQGAQGPQGPQGPQGATGPTGPQGPQGNQGPAGPQGPVGPQGPQGEPGVDF
DDTLLVSYSSLTSQNVNANGIFTYNIQNPNGSTFTAITANIANGTFTINEPGRYLFMWSF
NLDNTNNTTASAIVSLFRNGSRVFLSGTPRVAPGEIGVVNGSIAVNANAGDVFALVNNST
RNVLSQIISSPISVTPAILGESTGINSGIGSWVQIVRVSD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgataagaaaaatttataatcctaatagatattatgatgattacaatagatataattgt
tacgatagatataattgctatgatgatgagtattgtcaagatgattattattgcaaggaa
gactgttattgtaaagatgattgctatttagagataaattgcaattgttgcgattgttgt
aaacctggaccaaggggtccaagaggacctcaaggtcctaggggtcctcaaggaccaaga
ggtcctatgggatgtcaaggtgagcgtggtccaataggtcctatgggccctatggggcct
attggacctcaaggtccacaaggtgatcaaggtcttactggccctcaaggccctgctggt
cctcaaggcgaacaaggtccacaaggtgatcaaggtcctgttggtcctataggccctcaa
ggtcctcagggtgagcaaggtcttactggtcctcaaggacctgctggttctcaaggccct
gaaggtcctactggtcctcaaggtgctactggccctcaaggtcctgaaggtcctactggt
gctcaaggagatcaaggtcctgttggtcctcaaggagctcaaggtccacaaggccctcaa
ggtcctcaaggtgctaccggtcctactggcccacagggtcctcaaggtaatcaaggtcct
gctggtcctcaaggccctgttggtcctcaaggtcctcaaggtgaacctggagtggatttt
gatgataccttattagttagttattcctcattaacttctcaaaatgttaatgctaatggt
atattcacttataatatccaaaatcctaatggctcaacttttacagcaataactgccaat
atagcaaacggaacatttacaataaatgaacctggaagatatttatttatgtggtcattt
aatttagataacacaaataataccacagctagcgctatagtatctttatttagaaatggt
tctagagtatttttatctggaactcctagagtagctcctggtgaaataggcgtagtaaat
ggaagtattgccgtaaatgctaatgctggtgatgtatttgctttagttaataattctaca
agaaacgttttatcacaaataatatcttcaccaatttctgtaactccagctatcttagga
gaatctacaggaataaattcaggaataggatcttgggttcaaatagttagagtatctgat
taa
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