Clostridium perfringens ATCC 13124: CPF_1336
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Entry
CPF_1336 CDS
T00378
Symbol
rluB
Name
(GenBank) ribosomal small subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpf03009
]
CPF_1336 (rluB)
Enzymes [BR:
cpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CPF_1336 (rluB)
Ribosome biogenesis [BR:
cpf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CPF_1336 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PITM1-3
Motif
Other DBs
NCBI-ProteinID:
ABG84705
UniProt:
A0A0H2YUG7
LinkDB
All DBs
Position
1511257..1511967
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AA seq
236 aa
AA seq
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MEERLQKYMARCGVASRRKCEEIICSGKVKVNDIVVDSLGTKVDPSVDVVSVNNKVIRPE
ENKVYIMLNKPEGYVTTNKDEKNRKTILDIVKVNERIYPIGRLDYDSSGLLLLTNDGDVY
NKIIHPRVNLNKEYIALVKGIFTEEEMNKFRKGVDIGDYKTAECEIELLEKYTNSCKVKI
IIHEGKNRQIRRMCAAFNHEVVSLKREAIGSLTLKNLKKGEWRYLSSSEENYIKSL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagattgcaaaaatacatggcaaggtgtggagtagcatcaagaagaaaatgt
gaagaaataatttgcagtggaaaagtaaaggttaatgacattgttgttgactcccttggg
actaaggttgatccatcagtagatgttgttagcgttaataataaagtaatacgtcctgag
gaaaataaagtatatataatgttaaataagcctgaaggatatgttacaacaaataaagat
gaaaaaaatagaaagaccatattagatatagtaaaggtgaatgaaagaatatatcctata
ggacgtcttgactatgacagttcaggattacttttattaactaatgatggagatgtatac
aataagataatacatccaagagttaatttaaataaagaatatattgccttagtaaaagga
atttttacagaggaagaaatgaataaatttagaaaaggcgtagatataggagactataaa
acagcagaatgtgaaatagaattactagaaaaatacacaaatagctgtaaagttaaaata
atcattcatgaaggcaaaaatagacagataagaagaatgtgtgctgcctttaatcatgaa
gttgtttctttaaaaagagaagctattggaagcttgaccttaaagaatttaaagaaagga
gaatggagatatttaagtagttcagaagagaattatataaaatctctatag
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