Clostridium perfringens ATCC 13124: CPF_1477
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Entry
CPF_1477 CDS
T00378
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPF_1477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpf02000
]
CPF_1477
Transporters [BR:
cpf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CPF_1477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
BF9343_1606-like_C
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
ABG83988
UniProt:
A0A0H2YTW6
Structure
PDB
PDBj
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All DBs
Position
complement(1675029..1676075)
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AA seq
348 aa
AA seq
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MKKKILATLLTGLVLGTSLVGCGKTEGAEAGKKLVVSTWGLNEDVLKETVFEPFAKEHGV
EIVLDIGNNSERLTKMKNNPNSQIDITYLAESFAEQGVEAGIFDKLDYSKIPNASEMNEK
AKSTVEAGYGPAYTLNSIGIVVDPSAGIEINSWEDLWKPELKNKIAIPDITTTNGPAMVE
IAAEKAGVDVKTDNGEAAFKELEALKPNVVKTYSKSSDLANMFSNGEIVAAVASDFAFGT
ISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEVQEKTAKALNESP
VNKEVKLSEEETKNLTYGPVVDNAKVIDFKFVNSVMDQWVNNWNRIMN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaattttagcaaccttattaacaggattagtactagggacatctttagtt
ggatgtggaaaaacagaaggagcagaggcaggaaaaaaattagtagtttcaacttgggga
ttaaatgaagatgtattaaaggagacagtatttgaaccatttgctaaagaacatggtgtg
gaaatagttttagatataggtaataactcagaaagattgactaagatgaaaaataatcct
aactcacaaatagatataacttatttagcagaatcttttgcagagcaaggagtagaagca
ggtatattcgataaattagattattcaaagattcctaatgcaagtgagatgaatgaaaag
gctaaatctacagtagaggcaggatatggaccagcatatacattaaatagtataggaata
gttgtagatccttcagcaggaattgaaataaattcttgggaagatttatggaaaccagaa
cttaaaaataaaatagctataccagatattacaacaactaatggtccagcaatggtagaa
atagcagcagaaaaggcaggagtagatgttaaaactgataatggagaagctgcatttaaa
gaattagaagctttaaaaccaaatgttgttaaaacttatagtaaatcttcagatttagct
aatatgttctcaaatggtgaaatagtagctgctgtagcatcagactttgcttttggaaca
atttcaaaagctaaaccagaggttataaatgtaatacctgagtcaggaacttacttaaac
tttaatacaataaatataaataaaaattctaaaaataaagatttagcttatgaatttatt
aactatgcattaagcaaagaagttcaggagaaaactgctaaagctttaaatgaatcacca
gttaataaagaagttaaattaagtgaagaagaaactaaaaacttaacatatggaccagtg
gttgataatgctaaggtaattgactttaagtttgttaattcagtaatggatcaatgggtt
aataactggaacagaataatgaactag
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