Clostridium perfringens ATCC 13124: CPF_1613
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Entry
CPF_1613 CDS
T00378
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpf03016
]
CPF_1613 (rnz)
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CPF_1613 (rnz)
Transfer RNA biogenesis [BR:
cpf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CPF_1613 (rnz)
Prokaryotic type
CPF_1613 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Ral
Lactamase_B_6
Lactamase_B_4
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
ABG83193
UniProt:
Q0TQN4
LinkDB
All DBs
Position
complement(1822317..1823267)
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AA seq
316 aa
AA seq
DB search
MLNVILLGTGGGMPMPNRFLSSVVMNFKGRKILLDCGEGTQVTMRVNGTGFKSIDIICIS
HLHGDHIYGLPGLLSTIGNSGRVEDIYIIGPKGIKEVIEGFLITLPYLPYKLNILEDASN
LEFMVKKEKMELVEEDEKISSDLSIKTLELDHSSPCLGYSFNIRRGRKFNLEKALMNKVP
KEVWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTTDTRPTEDIPGFIKESDLYICE
GTYGSEEDMHKAIKNKHMTFKEAANLAKRGQVKELLLTHFSPAINDPKEFINNAREAFEN
SHVGSDGEERVLNFKK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgtaatcttgttaggaacagggggaggcatgcctatgccaaatagattttta
tcatcagttgttatgaatttcaaggggagaaaaattcttttagactgtggagagggaaca
caggttaccatgagagtaaatggaactggatttaaaagtatagatataatttgtataagt
catcttcatggagatcatatatatggattgccaggattactttctacaattgggaatagt
ggaagagtagaggatatatatataataggacctaagggaataaaagaggttatagaggga
tttttaataactctcccatatcttccatataaacttaacatactagaagatgcaagcaat
ttagaattcatggttaaaaaagaaaaaatggaattagttgaagaggatgaaaaaataagt
tcagatttaagtataaaaactctagaattagaccattcttctccttgtttaggatactct
tttaatataaggagaggaagaaaatttaatttagaaaaagcattaatgaataaagttcca
aaggaagtgtggtctaaacttcaaagaaatgaggaagttagtttaaatggagttaaatat
tatagttatatggtcttaggagatgaaagaaagggaataaaactaagttacacaacagat
acaagacctacagaggatataccaggttttataaaggaaagtgatttatacatatgtgaa
gggacttatggaagtgaagaggatatgcataaggccataaaaaataaacatatgactttt
aaggaggcagctaatttagctaaaagaggtcaggtaaaggaattattattaactcatttt
agtccagctattaatgatccaaaggaatttataaataatgcaagagaggcatttgaaaat
tcccatgttggaagtgatggagaggaaagagttttaaattttaaaaaataa
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