Clostridium perfringens ATCC 13124: CPF_1920
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Entry
CPF_1920 CDS
T00378
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf03030
DNA replication
cpf03430
Mismatch repair
cpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPF_1920
03430 Mismatch repair
CPF_1920
03440 Homologous recombination
CPF_1920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpf03032
]
CPF_1920
03400 DNA repair and recombination proteins [BR:
cpf03400
]
CPF_1920
Enzymes [BR:
cpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPF_1920
DNA replication proteins [BR:
cpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPF_1920
DNA repair and recombination proteins [BR:
cpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPF_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DNA_pol_B_exo1
DEDDh_C
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ABG83730
UniProt:
A0A0H2YRZ6
LinkDB
All DBs
Position
2156453..2157067
Genome browser
AA seq
204 aa
AA seq
DB search
MKLLFFDTETTGVKPGSICQLSYILVDTSTKPQKTIGKNIFFTVDEMEPEAERIHGFSLE
KLYELSEGMYFEDLYADFINDFLEADFIIGHNVQFDIKFLKHELLGLGEFFEPNNVFCTM
KYYKDICKILRPTGDYKNPKLEEVIKHLNITDSEISETANKYFQGSGNYHDARFDTAATY
LTVINGIKKGLIPRNYFTKLLEAK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacttttttttgatacagaaactacaggagtcaaacctggaagcatatgtcag
cttagttatatccttgtagacacttcaactaaacctcaaaaaacaataggtaaaaatata
ttctttacagttgatgaaatggaaccagaagctgaaagaatccatggtttttccttagag
aaattatatgaattaagtgaaggaatgtactttgaagatctttatgctgatttcataaat
gacttcttagaagcagattttataataggtcataacgttcagtttgatattaaattctta
aaacatgaattactaggtcttggagagttctttgaacctaacaacgtattttgtactatg
aaatattataaagatatttgtaaaatattaagacctactggagattataaaaatccaaaa
cttgaagaagtaatcaaacacttaaatataactgattctgaaataagtgaaactgctaat
aaatatttccaaggtagtggaaactatcacgatgctagatttgatacagcagcaacttat
cttactgttataaatggtataaaaaaaggattaattccaagaaattattttacaaaactt
ttagaagcaaaataa
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