Clostridium perfringens ATCC 13124: CPF_1990
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Entry
CPF_1990 CDS
T00378
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00730
Thiamine metabolism
cpf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CPF_1990 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpf03009
]
CPF_1990 (rsgA)
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
CPF_1990 (rsgA)
Ribosome biogenesis [BR:
cpf03009
]
Prokaryotic type
GTPases
CPF_1990 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
ABC_tran
FeoB_N
Septin
AAA_22
cobW
MMR_HSR1_Xtn
GTP_EFTU
Dynamin_N
AAA_23
AAA_29
AIG1
Ras
ATPase_2
AAA_33
Rad17
Guanylate_kin
P-loop_TraG
AAA_16
nSTAND1
nSTAND3
AAA_21
NPHP3_N
AAA_14
Roc
SMC_N
RNA_helicase
AAA_25
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABG82922
UniProt:
Q0TPL7
LinkDB
All DBs
Position
complement(2228538..2229401)
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AA seq
287 aa
AA seq
DB search
MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHER
SSELIRPTVANVTQAFVVFAIKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEK
ENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLCGPSGAGKSTLLNSFIDREHM
ETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNN
LCKFNGCNHYKEPKCAVKEAVEEGKINKLRYDFYIKTLEEIINRRGN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaattataataaaaggtataggtggattctattatataaaaacagatgaagga
attattgaatgtaaagctagaggtaaattcagatataattcattaaagcctatggtagga
gatagagttaccataaaagtagagaatggaaaaggtgtaatagaggatatacatgagaga
agctcagagcttataagaccaactgttgcaaacgtaacacaagctttcgttgtatttgca
ataaaaaatcctgacataaatttagatttattaaatagatttttaactctttgtgagtat
aatgatatacatgcagttgtatgtttaaataaagaagatttatgtacagaggaagaaaaa
gaaaacttaaaagaattaataaatgatataggttatgaggttctcttcataaatgccaag
gaaggaaaaggttttgatgctttaaaggaaagattagaacataacataacagtcctttgt
ggcccttctggagcaggaaaatctacacttttaaattcttttatagatagagaacatatg
gaaacaggaagtgtaagtgaaaaaataggaagaggtaagcatactactagacatagtgaa
cttatagatgtagacaatggatacttagttgatactccaggatttacaactttagatgtt
acttttatagatagagatagcttaaaatattgcttcccagaatttaatgattataataat
ctttgcaaatttaatggatgtaatcattataaagaacctaagtgtgctgtgaaagaagca
gttgaagagggtaaaataaacaagctaagatatgatttttatataaaaaccttagaagag
ataataaataggaggggtaattaa
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