Clostridium perfringens ATCC 13124: CPF_2104
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Entry
CPF_2104 CDS
T00378
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpf03009
]
CPF_2104
Enzymes [BR:
cpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CPF_2104
Ribosome biogenesis [BR:
cpf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CPF_2104
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABG84996
UniProt:
A0A0H2YV26
LinkDB
All DBs
Position
complement(2336001..2336921)
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AA seq
306 aa
AA seq
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MSLSKEVIKITEEEKGIRADKFLALKIDGVSRNFIQGLFDDGKILINGKAEKGKYKLSVG
DCVEVEIPEPEELKVEAEDIPLNIVYEDEDVIVVNKPKGMVVHPAPGNYTGTLVNALLHH
CDDLSGINGVIRPGIVHRIDKDTSGILVVAKNDNAHQKLAEQFKDHSIKREYYAIVEGRF
KKEGGTIDAPLGRHHRDRLKYAVVKDGKRAVTHYEVLKVFNSCSLVKCTLETGRTHQIRV
HMAFIGHPLLGDTVYGLKKQKKLSQEGQVLHAKTLGFIHPTTGEYVEFDSELPEYFEKIV
EKLGGC
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagtaaagaagtaataaaaataactgaagaagaaaaaggaataagagcagat
aaatttttagctcttaaaatagatggagtttcaagaaactttattcaagggctttttgat
gatggaaaaattttaattaatggaaaagcagaaaagggaaaatataagctttcagttgga
gattgcgttgaggtagaaataccagaaccagaggaattaaaagttgaagctgaggatatc
ccattaaatatagtttatgaagatgaagatgtaatagtagttaataaaccaaagggaatg
gtagttcatcctgcaccgggaaattatactggaactttagttaatgcattattacatcat
tgtgatgatttatcaggaataaacggggttataagacctggaatagtacacagaatagat
aaagatacttctggaatattagttgttgcaaaaaatgataatgctcatcaaaaactagca
gaacaatttaaagatcatagcataaagagagaatactatgctattgttgagggaagattt
aaaaaagaaggtggcacaattgatgcacctttaggaagacaccatagagatagattaaag
tatgctgtggttaaagatggaaagagagcagttactcattatgaagttcttaaagtattt
aattcatgttcccttgttaaatgtactttagaaacaggaagaacacatcagataagagtt
catatggcctttatagggcatccattacttggagatactgtttatggcttaaagaaacaa
aagaaattaagtcaagaggggcaagttcttcatgctaaaacattaggatttattcatcct
actactggagaatatgttgaatttgactcagaattgccagagtactttgaaaaaattgta
gagaaattaggagggtgttag
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