Clostridium perfringens ATCC 13124: CPF_2141
Help
Entry
CPF_2141 CDS
T00378
Name
(GenBank) RNA methyltransferase, TrmH family
KO
K03437
RNA methyltransferase, TrmH family
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpf03016
]
CPF_2141
Transfer RNA biogenesis [BR:
cpf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CPF_2141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
MRM3-like_sub_bind
SpoU_sub_bind
Adap_comp_sub
TSNR_N
Flu_PB2_1st
PA
SpoU_sub_bind_like
Motif
Other DBs
NCBI-ProteinID:
ABG83488
UniProt:
A0A0H2YRE4
LinkDB
All DBs
Position
complement(2385010..2385783)
Genome browser
AA seq
257 aa
AA seq
DB search
MLEIESKNNNLFKEIKKLKEKKHRIKSNKYLIEGLRFVEEAIKSKVSIDSIIFTESFKEK
NPDLFLKINENIKLIQMNETLLKQLCSTENPQGIVGVINMQNKELKSGELVVLVDKVQDP
GNMGTIIRTAHAAGAAGIVMTKGTVDIYNDKTLRSTMGSIFYIPIVEDNSLDFVKSLKKE
GYKLVVSSLQGKNNFFEENLQGKVMIAVGNEGNGVSDEVYDIADIKVKIPMPGEAESLNV
AVATSIMIYEKIRQSFK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaatcgaaagtaaaaacaataacttatttaaagagataaaaaagttaaaagaa
aaaaagcatagaataaagagtaataagtatcttattgaaggtttaagatttgtagaggaa
gctataaaaagtaaagtatcaatagattcaataatttttacagaaagttttaaggagaaa
aatcctgacttattcttaaaaattaatgaaaatataaagcttatacaaatgaatgaaact
cttttaaaacaactttgttcaacggaaaatccacaaggaattgttggtgttataaatatg
caaaacaaggaattaaaaagtggagagctagttgttttagtagataaggttcaagatcca
ggaaatatgggaacaataataagaacagctcatgcagcaggtgcagcaggaatagtaatg
actaaaggtactgttgacatatataacgataagactctaagatcaacaatgggttcaata
ttttatattccaattgttgaggataattctttagattttgtaaaatcattaaagaaggaa
gggtataaacttgtagtaagttctcttcaaggaaaaaataatttctttgaagaaaatctt
caaggaaaagttatgatagctgttggtaatgagggaaatggtgtcagtgatgaagtatat
gatattgcagacataaaagttaaaattcctatgcctggtgaagctgaatctttaaatgta
gctgtagctacttctataatgatatatgaaaagataagacaatcatttaaataa
DBGET
integrated database retrieval system
