Clostridium perfringens ATCC 13124: CPF_2203
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Entry
CPF_2203 CDS
T00378
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPF_2203 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpf03400
]
CPF_2203 (ruvB)
Enzymes [BR:
cpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPF_2203 (ruvB)
DNA repair and recombination proteins [BR:
cpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPF_2203 (ruvB)
RecFOR pathway proteins
CPF_2203 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
RNA_helicase
AAA_22
Bac_DnaA
bpMoxR
AAA_18
AAA_14
Sigma54_activ_2
NB-ARC
DUF815
NTPase_1
AAA_3
AAA_28
MCM
TsaE
AAA_2
AAA_24
IstB_IS21
AAA_17
AAA_PrkA
ABC_tran
NACHT
Parvo_NS1
AAA_19
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABG83567
UniProt:
Q0TP13
LinkDB
All DBs
Position
complement(2443566..2444606)
Genome browser
AA seq
346 aa
AA seq
DB search
MSERLVTSNEIGIDSTNEYSLRPEKINEYIGQDKVKERLNIFIKAAQRREEALDHVILYG
PPGLGKTTLANIIANEMGGNLKITSGPAIERAGDLAAILTTLNTNDVLFIDEIHRLNRSV
EEILYPAMEDYVLDIIIGKGAASKSIRLDLPKFTLIGATTRIGMLSSPLRDRFGVLCSME
YYTDEQLKEIIIRSAEILGCHITEEGAFEIAKRSRGTPRIANRLLKRVRDFAEVLYDNEI
TEEAAKKSLEILEVDGEGFDRIDNKILEAIIDNFNGGPVGIETLAYFVGEELDTIEDVYE
PYLLQKGFIVRTPRGRMATDKAYKHLGRVRFNESKIDSKQCTLFEK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaagattagttacctctaatgagattggaatagattcaactaatgaatacagt
ttgagaccagagaaaataaatgaatatataggtcaagataaagttaaagaaagactaaac
atattcataaaagctgctcaaagaagagaggaagccttagatcatgtaattttatatggg
ccaccaggtcttggaaagacaacattagctaatataatagcaaatgaaatgggtggaaat
cttaaaataacatcagggcctgctattgaaagagcaggagatttagcggcaatattaaca
accttaaacactaatgatgttttatttattgatgagatacatagattaaatagaagtgta
gaggaaatactatatcctgccatggaggattatgttttagatataattattggtaaaggg
gctgctagtaaatccataagactcgatttacctaaatttactctaataggtgccacaact
agaattggtatgcttagttcacctttaagagatagatttggggttttatgttctatggaa
tattatactgatgaacaattaaaggaaataataattagaagtgctgaaattttaggatgc
catataactgaagaaggggcctttgaaattgctaaaaggtcaaggggtactcctagaata
gcaaatagacttttaaagagagtaagagattttgcagaagttttatatgataatgaaatt
acagaagaggctgcaaaaaaatccttagagattttagaagttgatggagaaggctttgat
agaattgataataaaattctagaagccataatagataacttcaatggagggccagtaggg
atagaaaccttagcttacttcgttggagaggaattagatactatagaagatgtttatgag
ccatatcttctacaaaaagggtttatagttagaactccaaggggaagaatggcaacagat
aaagcatataaacacttaggaagagttagatttaatgaatctaagatagattctaaacag
tgtacgttatttgaaaaataa
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