Clostridium perfringens ATCC 13124: CPF_2226
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Entry
CPF_2226 CDS
T00378
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPF_2226 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpf02000
]
CPF_2226 (potD)
Transporters [BR:
cpf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CPF_2226 (potD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
ABC2_membrane_3
DUF166
Nakanori
Motif
Other DBs
NCBI-ProteinID:
ABG82715
UniProt:
A0A0H2YQ65
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All DBs
Position
2473475..2474557
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AA seq
360 aa
AA seq
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MKLKKFLALTCSTLLLSSLFLGCGPKKDEEATQDKNNNVLYVYNWGDYIDPELLTKFKEE
TGIDVKYDVYDTNEIMYQKLNSGNVSYDIVIPSDYMIEKMKEEDMLAKIDYSNIPNYKYI
GEQFKNLAYDPTNEYSVPYMWGTVGIIYNTKRVSDPVDSWNILWNPKYKDQVIMPDSVRD
AMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDGLILAYMVDQVKDAMVGGEASLAVAW
SGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAKHKENAEKFINFLCDPENAEQNVE
YIGYSTPNTAAYDLLPEDIRDDKVAYPDEESLKNCEVFIDLPSKILRKYDEAWLEIKCVY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaaaatttttagcattaacttgttcaacacttcttttatcatctcttttt
cttggttgtggaccaaaaaaggatgaggaagctactcaagataaaaacaataacgttctt
tatgtttataactggggagattacatagatccagaactacttactaaatttaaagaagaa
actggaatagatgttaaatacgatgtttatgatactaatgaaataatgtatcaaaaactt
aatagtggtaatgtatcttatgatatagtaattccttctgattacatgatagaaaaaatg
aaagaagaagatatgttagctaagatagattattctaatattcctaattataaatatata
ggagaacaatttaaaaatttagcttatgatccaactaatgaatactcagtaccatatatg
tggggaacagttggaataatatataatacaaagagagttagtgatcctgtagatagttgg
aatatcctttggaatcctaaatataaggatcaagttataatgccagatagtgttagagat
gctatggctgttgcagaaaaaaaattaggatattcattaaatacagaaaacctagaccaa
atagaagctgctaaaaaggagcttatgactcaaaagaaagatggattaatcttagcttac
atggttgaccaagttaaagatgccatggttggtggagaggcttcccttgctgttgcttgg
tctggagatgctgtaacaatgatagagagaaatcctgatttagcttatgctattcctaag
gaaggatcaaataaatggtttgatgccatagcaattcctaaaaatgcaaagcataaagaa
aatgctgagaagtttataaacttcctttgcgatcctgaaaatgctgagcaaaatgtagaa
tatataggatactctactccaaacacagctgcatatgaccttttacctgaggatataaga
gatgataaagttgcatacccagatgaagagtcattaaaaaattgtgaggtatttatagat
ttaccttctaaaatacttagaaaatatgatgaagcttggttagaaatcaagtgtgtttat
taa
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