Clostridium perfringens ATCC 13124: CPF_2327
Help
Entry
CPF_2327 CDS
T00378
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpf03016
]
CPF_2327 (ybbB)
Enzymes [BR:
cpf01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CPF_2327 (ybbB)
Transfer RNA biogenesis [BR:
cpf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CPF_2327 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_18
KAP_NTPase
AAA_22
DUF4011
RsgA_GTPase
CompInhib_SCIN
Motif
Other DBs
NCBI-ProteinID:
ABG83470
UniProt:
A0A0H2YSL8
LinkDB
All DBs
Position
complement(2584572..2585642)
Genome browser
AA seq
356 aa
AA seq
DB search
MFGLISYEEIYGHEDEYIFIDVRSQKEAFEEPMIGSVNIPVLLNEERDVVGTLYVRESAE
AAKEQGIEFISRRLPEIFKQVQELYRNKHGKKLVIFCARGGMRSGSLHSLLNSLGINCYK
LEGGYKAYRSFIINKIEEFSKEIDFIVLYGNTGVGKTEMLYKLEEKGYDVLDLEGCANHR
GSILGGVGLGDCNTQKRFDALVYDKLRHRNSNIVFIEGESKRIGRILIPDPLFEKMYEGA
KLKISADPEIRAERLVKEYTAFENVNEQLDEALGVLKKHISQERVEQYKDLVAKGDYKKV
ALELMEKYYDPRYGTSAKKKTFRNELEINDIENELFKLEEIYKEISEELREDVYEQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtttggattaataagttatgaggagatatatggacatgaggacgagtatatctttata
gatgttagaagccaaaaggaagcctttgaagagcctatgatagggtctgtaaatattcca
gtgcttttaaatgaagagagagatgtagtcggaactttatatgttagagaaagtgcagag
gctgcaaaagagcaaggaatagaattcatctctagaagattgcctgaaatatttaaacaa
gttcaagagctttatagaaataagcatggtaaaaaacttgttattttttgtgcaagaggt
ggaatgagaagtggaagtctacattcattactaaatagtttaggaataaattgttataaa
ttagaaggcggatataaagcatatagaagttttataataaataaaatagaagaattctca
aaggaaattgattttatagtattatacggaaatactggtgtaggaaaaacagaaatgcta
tataaattagaagaaaagggatatgatgttttagacttagaaggatgcgcaaatcataga
ggttcaattcttggaggagttggattaggtgattgcaatactcaaaagagatttgatgca
ttagtttatgataaacttagacatagaaattctaacattgtatttattgaaggagaaagt
aaaagaataggaagaattctaatacctgatcctttatttgaaaagatgtatgaaggtgca
aaacttaaaataagtgcagatccagagattagagcagagagattagttaaggaatatact
gcctttgaaaatgtaaatgaacaattagatgaagctttaggagttcttaaaaagcatata
agtcaagaaagagtggaacaatataaagacttagtagccaaaggtgactataagaaagta
gccttagaacttatggaaaaatattatgatcctagatatggaacaagtgcaaagaaaaaa
acatttagaaatgaattagagataaatgacatagaaaatgaattatttaaattagaggaa
atatataaagagatttcagaggaattaagggaggatgtatatgagcaataa
DBGET
integrated database retrieval system
