Clostridium perfringens ATCC 13124: CPF_2386
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Entry
CPF_2386 CDS
T00378
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpf03019
]
CPF_2386
03009 Ribosome biogenesis [BR:
cpf03009
]
CPF_2386
Messenger RNA biogenesis [BR:
cpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPF_2386
Ribosome biogenesis [BR:
cpf03009
]
Prokaryotic type
rRNA processing factors
CPF_2386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ABG82265
UniProt:
A0A0H2YNG6
LinkDB
All DBs
Position
complement(2654767..2656209)
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AA seq
480 aa
AA seq
DB search
MRDIYVERRENLLRVAIKKNNLLSECYIEEESLEPVQGEIYKGIVKRVVPGIKSAFIDIG
YSKQAYMILGEEEKDLKQGDGIIVEVLKEQFGSKGAKVTSKISLAGRYCVLETSRNDISI
SRKIEDLEFKKELENSLIKPSELGVTVRTKAQSASIFEIQEEIEELYRNYKEVIREGKFS
LNPKRLLGKGDLINKIIRDDIDAYTSSIIVDSIEDYERIKDSISNSEYLKVILYDDARSL
FDYYGIEKEILSLRNNRVNLNCGGDIVIEKTEAMYVIDVNSGKNTNHKNKEKTAYETNKN
AAIEIARQIKIRNLGGIILVDFIDMYSQENKKKILEILKDEFKSDSQRAKIFPFTELGLV
QITRYRKGKSIYEYIEENCLACNGHGKRLKLSYINLLLRNEILKKNGEGKIKDFHIEINS
IYEKDIRGNIFEFLKEIGALDLNIYLNFQESKDFYKVEPLIFKNQIESVKEYLVKNIEKY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagagatatatacgtagaaagaagagaaaatttattaagggttgccataaagaaaaat
aatcttttaagtgagtgctatatagaagaagaaagtctagaacctgttcaaggagagata
tataaaggcatagttaaaagagtagttccaggaataaagagtgcctttatagatattggg
tatagtaaacaggcctatatgatacttggagaagaggaaaaagatctaaaacaaggagat
ggaataattgttgaagtattaaaagagcaatttggaagtaaaggggcaaaagttacttca
aaaatatctttagcaggaagatattgtgttttagaaacttcaagaaatgatatttcaatt
tcaagaaaaatagaagatctagagtttaaaaaagaacttgaaaattcattgataaaacca
agtgaattaggggttactgttaggacaaaagcccaatcagctagtatttttgagattcaa
gaagaaatagaagaactatatagaaactataaagaggttattagagaaggtaaattctcc
ttaaatccaaaaagattattgggtaaaggagaccttattaataagataattagagatgac
attgatgcttatacttcttcaataattgttgattctatagaagattacgaaagaataaaa
gatagtatttctaattctgaatatttaaaagtaattctttatgatgatgctagaagtctt
tttgattattatggtattgaaaaagaaattcttagccttagaaataatagagttaattta
aattgtggtggagacatagttatagaaaaaacagaggctatgtatgttatagatgtcaat
tcaggtaagaatacaaatcataaaaataaagaaaaaactgcctatgaaactaataaaaat
gcggcaatagaaattgctagacaaattaaaattagaaatttaggtggaataatattagtt
gattttatagatatgtattcacaggaaaacaagaaaaaaatattagaaatattaaaagat
gaatttaaaagtgatagccaaagagctaaaatttttccttttacagaacttggattggta
caaataacaagatatagaaaaggaaaaagtatttatgaatatatagaagaaaattgctta
gcatgtaatggtcatggaaagagattaaagttatcttatataaatcttcttttaagaaat
gagattttgaagaaaaatggagaaggaaagataaaagatttccatatagaaataaactct
atttatgaaaaagatattagaggaaatatttttgagtttttaaaagaaattggagcatta
gatttaaatatttacttgaattttcaagaatctaaagacttttataaagtagaaccattg
atctttaaaaatcaaatagaaagcgtaaaagagtatttggtgaagaatatcgaaaaatat
taa
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