Clostridium perfringens ATCC 13124: CPF_2395
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Entry
CPF_2395 CDS
T00378
Name
(GenBank) putative penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00550
Peptidoglycan biosynthesis
cpf01100
Metabolic pathways
cpf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPF_2395
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPF_2395
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpf01011
]
CPF_2395
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CPF_2395
Peptidoglycan biosynthesis and degradation proteins [BR:
cpf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CPF_2395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP_dimer
Transpeptidase
MS_C
Motif
Other DBs
NCBI-ProteinID:
ABG83952
UniProt:
A0A0H2YT58
LinkDB
All DBs
Position
complement(2664005..2667076)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRSSINGKTPIDRYKILIGIMIIVFVSIVARLVYLQVFNYEEFKQRADTRSMRFLSEQAP
RGKIYDSNGDILATNRQTYTLTFTETDESKKNFYTTIDKVYSILKENNQSILDNFKIRIN
ENGELYFDVSGDTEKLRLLKDIGMGDKVKNVLFKNKEGDLTAEEEDQIDKELLKITPDEA
FNFLVKEYQLYDVLNPTEEEAKSYKNMEPKEITDILLKKYSLQDIRGYMLVKNAMKMQSF
SGYKPVTIAKDINKETAFIFYQRLNDLPGIDVSIEPMRYYPYNELGSSFLGYVASINGDQ
KAKYEARGYDASTDLIGKAGIEAAFESELKGVKGGTTVKVNSSGRKKEELYDLESYPGNN
VHLTIDKDIQYSAETSMKYLLDFLQTRNTRDSDVNTKNATRGAAVAIEVDTGKVLALVSY
PGFNPNEFAKGELDPVVAKEYFQPDYEAFAQQFIARNALNKTVDDLFPKNSKTGLREDLY
DLYPKRFYNYATLGMIPPGSTFKPVTSVAALEDKVITPSSTVYANGQNFGGTYPEIFGKN
PANWPRDKNYTGYADLYTALEHSSNSYYFDSAVKMYYKNGGDPYGDGRYKKSSTEALDSI
AKYAWQFGLGVDPNSDKKASTGIEISENFGQVYNFESFKNQTIALMRFTLVDSLEKGTFV
NSPSPDFPQVNIGVNDRDSKELAAAKESIKKDIENSLNKLGDGNTIDEKALSESLKKDFK
TLYNLDSAYQESIKNFNGIKGKDEDEKVDKAINLTVQRIVAWVVGDIAYQIVSPRNLTDS
AIGQSISNFTPVQLASYVATLANGGTRYKTHLVDKITDAQGNLVEEFKPEVLNKVDMSKA
TLDAVKEGMRRVNANGSASSIMSGFPIVTGGKTGTATFRNDQSDYGRTDYGVYISFAPLD
NPKIAVATVLYDGGHGYYGSFIARTIYETYFRDQLKKDYPDYKPKNLDFNAYDYSLNPPL
EAIKDSNINSKVENAELDSSGKPVEGSQDNSSENKKEDDKSQNNNQDNNNQNDKTKVDEN
KAH
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaagttcaataaatggaaaaacgcctatagatagatataaaattctcataggaata
atgataatagtatttgtatctatagtagcaagattagtttatcttcaagtatttaattat
gaagaatttaaacaaagagctgatactagatctatgagatttctatcagaacaggctcca
agaggtaaaatttatgattcaaatggggacattttagctactaatagacaaacatacaca
ttaacatttactgaaacagatgaatctaagaaaaacttttatactactatagataaagtt
tattctattttaaaagaaaataatcaaagtatattagataattttaagattagaattaat
gaaaatggagaactttattttgatgtttcaggtgatactgaaaaactaagacttttaaaa
gatattggaatgggtgataaggttaaaaatgttctttttaagaataaagaaggagattta
actgctgaggaagaagatcaaatagataaagagcttctaaagattactccagatgaggct
tttaatttcttagtaaaggaatatcaattatatgacgttttaaatcctacagaggaagag
gctaagtcatataaaaatatggaaccaaaagagataacagatatattgttaaagaaatat
tctcttcaagatataagaggatatatgcttgttaaaaatgctatgaaaatgcaaagtttc
tcaggatataaaccagttacaatagctaaggacataaacaaagaaactgcatttatattc
tatcaaaggcttaatgatttaccagggatagatgtaagtatagagccaatgagatactat
ccatacaatgaattaggttcttcattcttaggatatgtagcttctataaatggagatcaa
aaagctaagtatgaagcaagaggatatgatgcttctactgatttaataggaaaagctggt
atagaagcagcttttgaaagtgaactaaaaggtgttaagggaggaactacagttaaggta
aactcttctggtagaaaaaaagaggagctttatgacttagaatcttacccaggaaataat
gtacatttaactatagataaggatattcaatattcagcagaaacttcaatgaaatatctt
ttagattttcttcaaacaaggaatacaagggattccgatgtaaatactaagaacgcaaca
agaggagcggcagtagctatagaagtagatacaggaaaggttttagctttagttagttat
ccaggatttaatccaaatgagtttgctaagggagagttagatccagttgtggcaaaggaa
tacttccaaccagattacgaagcctttgcacagcaatttatagctagaaatgctttaaat
aaaacagtagatgatcttttccctaaaaattcaaaaactggattaagggaagatttatat
gatctttatccaaaaagattctataattatgctactttagggatgattccaccaggatct
acttttaaacctgttaccagtgtggctgccttagaggataaggttataactccaagttca
acagtttatgctaatgggcaaaactttggaggaacatatccagagatatttggtaaaaat
cctgcaaactggccaagagataaaaactatacaggatatgcagatttatatactgcatta
gaacattcatcaaactcatattattttgactctgccgtaaagatgtattataaaaatggt
ggagatccatatggagatggaagatataagaagagtagtacggaagctttagattctatt
gcaaaatatgcatggcagtttggattaggtgttgatccaaattcagataaaaaggcttca
acaggaattgaaatatctgaaaattttggtcaggtttataattttgaatcttttaaaaat
caaacaatagctcttatgagatttactttagttgattctcttgaaaagggaacctttgtt
aattctccttctcctgattttccacaggtgaatataggggttaatgatagggattctaaa
gagttagcagcggctaaggaatctataaaaaaagatatagagaattctctaaataagctt
ggagatggaaatactattgatgaaaaagctttaagtgagtctttaaaaaaggattttaaa
actttatataatttagattctgcctatcaagaaagtattaaaaactttaatggaataaaa
ggtaaggatgaagatgaaaaagttgataaggcaataaacttaacagttcaaagaatagtt
gcatgggttgtgggagatattgcttaccaaatagtttcaccaagaaaccttactgactct
gctataggacagagtataagtaactttactcctgtacagttagcaagttatgtggcaacc
ttagcaaatggaggaacaagatataagacgcatttagttgataaaataactgatgctcaa
ggaaacttagtagaagaatttaaaccagaagttttaaataaggttgatatgtcaaaagct
actttagatgctgttaaagaaggtatgagaagggttaatgctaatgggtcagcaagttct
ataatgtctggattccctattgtaacaggaggtaaaactggtactgctactttcagaaat
gatcaatcagattatggaagaacagactacggggtttatatttcctttgctccactagat
aatcctaagattgctgtggcaacagttctttatgatggtggtcatggatattatggatca
tttatagcaagaactatttatgaaacttactttagagatcaattaaagaaggattatcct
gattataagcctaaaaatctagatttcaatgcttatgattattcattgaatccaccttta
gaagctatcaaggattcaaatataaatagtaaggtagaaaatgcagaattagattcttcg
ggaaaaccagttgaaggatcacaagataatagttctgaaaataaaaaagaggatgataaa
tctcaaaataataatcaagataacaataatcaaaatgataaaactaaagtagatgaaaat
aaagctcattaa
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