Clostridium perfringens ATCC 13124: CPF_2405
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Entry
CPF_2405 CDS
T00378
Name
(GenBank) ribosomal protein S1 family
KO
K02945
small subunit ribosomal protein S1
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CPF_2405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cpf03011
]
CPF_2405
Ribosome [BR:
cpf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CPF_2405
Bacteria
CPF_2405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
WxLIP_PGBD
DUF2110
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
ABG83327
UniProt:
A0A0H2YQX4
LinkDB
All DBs
Position
complement(2676482..2677618)
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AA seq
378 aa
AA seq
DB search
MSENLTMSELMDSFELKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNF
DINSINVDDDIFVMVLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVK
GGIVGDFNGLRVFMPASQCAGRRIENLEELVGKTLEVRVIEFNKENRKVVVSRRVIDEEI
RNNEKKALWSSIKEGEKRKGKVTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVSV
GDEVEVFVSEVDMDRERIALSLKDVIKNPWETLEGLKVGDVVSGKVTNFIKVGAFVEVLP
GIEGLVHISEITDENIAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEYMQY
NDEEEGYSLADLFKGLNL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatcttacaatgtcagaattaatggatagctttgagttaaagcattttcat
aaaggtgaaatagttaaagggaaagttataagcgtaaagaatgatgaaataatagttaac
attggtcattttgcagatggtgtggtaccaagaaatgaaatttcaaatgataagaatttt
gatataaattcaataaatgtagatgatgatatatttgtaatggtattaagtggagatgat
ggagaaggaaatgttcttctatcaaagaaaagagcagatgcaataaaggtttgggatgat
ttaaaagaagcatttgaagaagaaaaatcaataaaagtttctttaaaagaagttgttaaa
ggtggaatagtaggagattttaatggtcttagagtatttatgccagcttctcaatgtgca
ggaagaagaatagagaatttagaagaattagtaggaaaaactttagaagttagagttata
gaatttaataaagagaatagaaaagttgttgtttcaagaagagtaatagatgaagaaata
agaaataatgaaaagaaagctctttggtcttcaattaaagaaggagaaaaaagaaaagga
aaagtaactagattagctaagtttggtgcttttgttgatattggtggagtagaaggatta
gttcacttaagtgatatgtcatggtcaagagttcataagccagaagaggttgtatcagtt
ggagatgaagtagaagtatttgtatcagaagtggatatggatagagagagaatagcactt
tcattaaaagatgttattaaaaatccatgggaaacattagaaggattaaaagttggtgat
gttgtttcaggaaaagtaactaattttataaaggttggagcttttgttgaagtattacca
ggaatagaaggattagttcatatttcagaaattactgatgaaaatatagctaagccatca
gatattttagaattaggtcaagaagttaaggttaaaatcttaaatatagatgatgaaaac
aagaaaatgagcttaagtataaaagatgctgtagaaacttcaaatgaatatatgcagtat
aatgatgaagaggaaggttattcattagctgacttgttcaaaggattaaatctatag
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