KEGG   Clostridium perfringens ATCC 13124: CPF_2405
Entry
CPF_2405          CDS       T00378                                 
Name
(GenBank) ribosomal protein S1 family
  KO
K02945  small subunit ribosomal protein S1
Organism
cpf  Clostridium perfringens ATCC 13124
Pathway
cpf03010  Ribosome
Brite
KEGG Orthology (KO) [BR:cpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CPF_2405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cpf03011]
    CPF_2405
Ribosome [BR:cpf03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    CPF_2405
  Bacteria
    CPF_2405
SSDB
Motif
Pfam: S1 S1_RRP5 Spt6_S1 S1_2 OB_RRP5_4th WxLIP_PGBD DUF2110 RNA_pol_Rbc25
Other DBs
NCBI-ProteinID: ABG83327
UniProt: A0A0H2YQX4
LinkDB
Position
complement(2676482..2677618)
AA seq 378 aa
MSENLTMSELMDSFELKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNF
DINSINVDDDIFVMVLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVK
GGIVGDFNGLRVFMPASQCAGRRIENLEELVGKTLEVRVIEFNKENRKVVVSRRVIDEEI
RNNEKKALWSSIKEGEKRKGKVTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVSV
GDEVEVFVSEVDMDRERIALSLKDVIKNPWETLEGLKVGDVVSGKVTNFIKVGAFVEVLP
GIEGLVHISEITDENIAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEYMQY
NDEEEGYSLADLFKGLNL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgagtgaaaatcttacaatgtcagaattaatggatagctttgagttaaagcattttcat
aaaggtgaaatagttaaagggaaagttataagcgtaaagaatgatgaaataatagttaac
attggtcattttgcagatggtgtggtaccaagaaatgaaatttcaaatgataagaatttt
gatataaattcaataaatgtagatgatgatatatttgtaatggtattaagtggagatgat
ggagaaggaaatgttcttctatcaaagaaaagagcagatgcaataaaggtttgggatgat
ttaaaagaagcatttgaagaagaaaaatcaataaaagtttctttaaaagaagttgttaaa
ggtggaatagtaggagattttaatggtcttagagtatttatgccagcttctcaatgtgca
ggaagaagaatagagaatttagaagaattagtaggaaaaactttagaagttagagttata
gaatttaataaagagaatagaaaagttgttgtttcaagaagagtaatagatgaagaaata
agaaataatgaaaagaaagctctttggtcttcaattaaagaaggagaaaaaagaaaagga
aaagtaactagattagctaagtttggtgcttttgttgatattggtggagtagaaggatta
gttcacttaagtgatatgtcatggtcaagagttcataagccagaagaggttgtatcagtt
ggagatgaagtagaagtatttgtatcagaagtggatatggatagagagagaatagcactt
tcattaaaagatgttattaaaaatccatgggaaacattagaaggattaaaagttggtgat
gttgtttcaggaaaagtaactaattttataaaggttggagcttttgttgaagtattacca
ggaatagaaggattagttcatatttcagaaattactgatgaaaatatagctaagccatca
gatattttagaattaggtcaagaagttaaggttaaaatcttaaatatagatgatgaaaac
aagaaaatgagcttaagtataaaagatgctgtagaaacttcaaatgaatatatgcagtat
aatgatgaagaggaaggttattcattagctgacttgttcaaaggattaaatctatag

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