Clostridium perfringens ATCC 13124: CPF_2538
Help
Entry
CPF_2538 CDS
T00378
Name
(GenBank) bacterial extracellular solute-binding protein, family 5
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf01501
beta-Lactam resistance
cpf02010
ABC transporters
cpf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPF_2538
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPF_2538
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPF_2538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpf02000
]
CPF_2538
Transporters [BR:
cpf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CPF_2538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TP53IP5
Motif
Other DBs
NCBI-ProteinID:
ABG84318
UniProt:
A0A0H2YUN9
LinkDB
All DBs
Position
complement(2794270..2795790)
Genome browser
AA seq
506 aa
AA seq
DB search
MKKVILFICLIILLVVGVGRSYVDVTPVSNMNFEYNEGLIYSLESLPDTIRPSESLNKGE
EDLVSNIFSGLVEVNEKGEPIPDLAMGWKISDDGLEYTFKINEKNKWSNGTEVTAKDFQI
FFRDLLSPDNEDYTSNELYSIYGVKDYREGKIDFSEVAISSPDDYTLVLRMNNRDDNLLK
NLAKPIYRLRDLNEPLDNYKKDFNEISYTGPYVIYDVTKDGFIRLKDNPYNSSELEIKDI
AFKEKDSDEIELAAFNLEKVDILKNPPIIYSEDIGLYKDLSKYNSDILKLMIVNSDKAEM
AQGISNIMQVLISDSNILKNNLGKPYIKVINNKEEIHSIKKDGDKGDYKINESEKNNLKE
SGKNTLKKVLNNNEVVKIVVGNNEEDKALANELKKFLDKELAIKSIVKIHDEGIEEVIKS
GEFNIAFSEFNLNEKNSESLKKEDINKEEGEVEDKSEEEEKETATSEKPNLSLVSLYFKN
DVWCKSPKVNYLFIDSNGNLILKYSS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtaattttatttatatgtttaataattttattagtagttggagtaggaagg
agttatgtggacgtaacccctgtttctaatatgaactttgaatataatgaagggcttata
tattctcttgaaagtttaccagataccataaggcctagtgaatccttaaataaaggagaa
gaggatttagtaagcaatatattttcaggactagttgaggtaaatgaaaaaggagaacca
attccagaccttgctatgggatggaagattagtgatgatggcttagaatatacatttaaa
attaatgaaaaaaataagtggagtaatggcacagaagtgacagcaaaggattttcaaata
ttttttagggatttattaagtccagataatgaagattatacaagtaatgagttatatagt
atttacggagttaaggattatagagaagggaaaattgattttagtgaagtagcaataagt
agtcctgatgattatacattggttttaagaatgaacaatagggatgataatttacttaaa
aatttagctaaacctatatatagactaagagatttaaatgaaccattagataattataag
aaagattttaatgaaatatcatatacggggccatatgttatatatgatgtaactaaggat
ggatttataagattaaaagataatccttataatagtagcgaattagaaataaaagatata
gcttttaaggagaaagactctgatgaaattgagttagcagcttttaatctagaaaaagta
gatattttaaagaatcctcctataatatattcagaagatataggattatataaagattta
agtaaatataatagtgatattttaaagttaatgattgtaaatagtgataaagctgaaatg
gctcagggaatatctaatattatgcaagttttaattagtgatagtaatatattaaaaaat
aatttaggaaaaccatatataaaagtaataaataacaaagaagaaattcactcaattaaa
aaggatggagataaaggagattataagattaatgaatcagaaaaaaataatcttaaagaa
tcaggtaaaaatactttgaaaaaggttcttaataataatgaggtagtaaaaatagttgta
ggaaataatgaagaggataaagctttagcaaatgaactgaaaaaatttttagacaaggag
ctagccataaagagtatagtaaaaattcatgatgagggtatagaggaagtaataaaaagt
ggagagtttaatatagcttttagtgaatttaacttaaatgaaaaaaactcagaaagctta
aaaaaggaagatataaataaagaagagggagaagtagaggataagagtgaagaagaggaa
aaagaaactgctacttcagaaaagcctaatttaagtttagttagtttatattttaaaaat
gatgtttggtgtaagtcaccaaaggttaattatttatttattgattcaaatggaaattta
atattaaaatatagcagttaa
DBGET
integrated database retrieval system
