Clostridium perfringens ATCC 13124: CPF_2570
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Entry
CPF_2570 CDS
T00378
Name
(GenBank) secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cpf02044
]
CPF_2570
02035 Bacterial motility proteins [BR:
cpf02035
]
CPF_2570
Secretion system [BR:
cpf02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CPF_2570
Bacterial motility proteins [BR:
cpf02035
]
Pilus system
Pilus assembly proteins
CPF_2570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_14
AAA_16
ATPase_2
nSTAND3
cobW
ABC_tran
AAA_7
AAA_19
ResIII
AAA_30
AAA_18
AAA_23
AAA_29
AAA_11
AAA
DUF4388
NPHP3_N
DUF87
DEAD
Rad17
Microtub_bd
Toprim_4
FtsK_SpoIIIE
Zeta_toxin
SLFN-g3_helicase
AAA_24
NTPase_1
SRP54
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABG83196
UniProt:
A0A0H2YQQ2
LinkDB
All DBs
Position
complement(2834874..2836562)
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AA seq
562 aa
AA seq
DB search
MISYQKKRLGDILIESGKLTEDKLKEALIIQKQVGKRLGEILVEQNFVTEEDIIEVLEKQ
LNIERVNLEIIRIDRRAIKMISENVCRKHLIVPYEIDDNTIKVAMADPLDIVAIDDVEIS
TGLNVRPYIAVKQSIQRAIDIYYSNQKVLSAAEELTKEVDEGNNLILDNIEEVDNLDNAP
IIKMIEYVMKNAVEERASDIHIESYENILRIRYRIDGKLHTISTLPVDTLAPLVTRIKIL
ANLDISEKRLPQDGRILTRFGDKQIDLRVSILPMITGEKIVIRIINKENFIISKEGLGIK
DYELNLLEKITKHSNGIILVTGPTGSGKTTTLYTILNELNTDSKNIITIEDPVEVSIEGI
NQVNVNNKVGLTFATGLRSILRQDPDIIMIGEIRDSETAQIAIRSAITGHLVLSTLHTNN
APSSILRLEDMGVQRYLIANAIKGVIAQRLVRKICPKCKLQYDATPYEKEILNIDKNEEL
ILHKGKGCAYCNNTGYVGRMGIYEIMEVTKEHREAILENKSADILKEISIKNGMRTLGQA
CRSLVLEGNTTVEEMLNITYDM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttgattagttatcagaaaaagcgtttaggagatatactaattgaatcaggaaagcttaca
gaggataagcttaaagaagcattgattattcagaagcaggttggaaagaggcttggagaa
attttagttgaacaaaactttgttactgaagaggatataatagaagttttagaaaaacaa
ttaaatattgaaagagtaaatcttgaaattataagaatagatagaagagctataaagatg
atttcagaaaatgtttgtagaaagcatttaatagttccatatgaaatagatgataatacc
ataaaagttgcaatggcagatcccttagatatagttgcaatagatgatgttgagatttct
acaggtttaaatgtgcgtccttatatagcagtaaaacaatctattcaaagagctatagat
atatattattcaaaccaaaaggttttatcagcagcggaagaattaactaaggaagttgat
gaaggaaataatcttattttagataatattgaagaagttgataacttagataatgctcca
attataaaaatgattgaatatgtaatgaaaaatgcagtagaggaaagagctagtgatata
catattgaaagctatgaaaatatattaagaattagatatagaatagatggtaaattacat
acaatatctactttgccagtagataccctagctcccttagttactcgtattaaaatttta
gcaaacttagacatatcagagaaaagacttcctcaagatggaagaattcttactagattt
ggagataaacaaattgatttaagagtatctattcttccaatgataacaggagaaaagata
gttataagaataataaataaagaaaatttcataatttctaaggaagggcttggaataaag
gactatgaacttaatttattagaaaaaataacaaagcattctaatggaataattcttgtt
acaggtcctacaggaagtggtaaaacaacaacgctctatactattttaaatgagctaaat
acagatagtaaaaatattattactatagaagatcctgttgaagtatcaattgaaggaatt
aaccaagttaatgttaataataaagtggggttaacttttgcaacgggattaagatctata
ttaagacaggatccagatataataatgattggagaaataagagattctgaaacggctcaa
atagcaataagatcagctattacaggtcatttagttttatcaactttacatactaataat
gctccatctagtattttaagacttgaggatatgggggttcaaagatatttaattgccaat
gctattaaaggagttatagctcaaagacttgttagaaaaatttgtccaaagtgtaaatta
caatatgatgctacaccatatgaaaaagaaatattaaatatagataaaaatgaagaactt
atacttcataaaggtaaaggttgtgcttattgtaataatactggttatgtaggtagaatg
ggtatttatgaaattatggaagtgactaaagaacatagagaggctattttagaaaataaa
agtgcggatattcttaaggagatttcaattaaaaatggcatgagaactcttggacaagca
tgtagaagtttagtcttagagggaaataccacagttgaagaaatgttaaatataacttat
gatatgtaa
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