KEGG   Clostridium perfringens ATCC 13124: CPF_2596
Entry
CPF_2596          CDS       T00378                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cpf  Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:cpf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cpf02048]
    CPF_2596 (hsdR)
Enzymes [BR:cpf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CPF_2596 (hsdR)
Prokaryotic defense system [BR:cpf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CPF_2596 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C DEAD Helicase_C NeuB
Other DBs
NCBI-ProteinID: ABG84559
UniProt: A0A0H2YTZ3
LinkDB
Position
complement(2860476..2863655)
AA seq 1059 aa
MSYLGNEETLVELPAVDYLEKNLGYSFIHGKDLTPESGERDSLSDVVLINRLRDALKRLN
PWMNEENLDRAIRYISRADNLGSGLLEINEKIYDALVDLTFTVEQDLFGNGQKKPQTVHF
IDWNDVDNNDFLVVRQFEVQTLSGKSIFPDIVIFINGIPVVVLEAKSPFLEKGNNECIGK
KQAYEQLRRYMNARDESLGEGAPKLFYTNFFTGILNRYNAYVGTISSSYNYYLEWKDPYP
FKLEEVEDYKNCGQNILLQGFLEKKNLLDLMRNFIVFEAEDGVVIKKVCRYQQFRAVNKA
LNKIKNGKDKISRGGVVWHTQGSGKSLTMVFLARKIKRTQGLTDSTIVIVTDRIDLDKQI
AGTFERTLGKITTPVRADTIDKMKKLLSNPQPQIIMTTIQKFQSETEEKEVMLDGENLTQ
KYAVEYPVLSTKQNIIVLADEAHRSQYKDTAANMRKALPNAVFIGFTGTPIDKEDKSTPR
TFGGYIDKYSIKQAVDDGATVKIVYEGRRPDLQVIGESLEELFDEAFSDRTDEEKEAIKQ
KYANKKTVVESEDRIDEIAKDLLKHYKEQILPNGFKAQIVCVSREACVKYYDALNRHMKE
ILGEGFEAQVIFSGDNNDKPHLKKHFTTKSEQEKLIKRFKKPINKDKLTFLIVKDMLLTG
FDAPIEQVMYLDRPLKEHTLLQAIARVNRTSTREVERQLENGEIVKENITKQCGYIVDYY
GISNYLEDALAIFDKEELGKPMESLDDLYNEMLSYRESIMSMFRGVDKNNLDALVNKIEP
EDKRAEFELMYRKFSGAVESLLPSHVDTEILNDLKWLSYIRAAAKAKFSPSESIDIADCG
EKVREIIETHLKSLGVRSWIEPITLFEKDFKDKINTLKSDEAQASAMEHAIKHTINIRRK
ENPVYYASLLERLQKILDETKNDWIERKIRLNKFIKNHVEDGAANEASDLGLDEKEFAFF
KVVKKYLEDGGEEFIAKEEKACYISDETVELSKQIAKEVKEIAENAGIDWVTTPYKTNNV
EREIKLMLIRKYAKKIPRNIREKLMEPLLNLAKIHFDIV
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgtcatacttaggtaatgaagagactttggttgaattaccagctgttgattatttagag
aaaaatttaggctattcttttattcatggtaaggatttaactcctgaaagtggggaaaga
gattctttatctgatgttgttttgattaatagattaagggatgctttaaaaagattaaat
ccatggatgaatgaagaaaatttagatagagcaattagatatatttctagagcagataat
ctaggaagtggtttattagagataaatgaaaagatatatgatgcattagtagatttaact
tttactgttgaacaggatttatttgggaatggtcagaaaaaaccacagacagttcatttt
atagattggaatgatgttgataataatgattttcttgtcgttagacagtttgaagttcaa
actctttcaggaaagtctatatttcctgacatagttatttttattaatggtattccagta
gttgttttagaagctaaatcaccttttttagaaaaaggaaacaatgaatgtattggaaaa
aaacaagcttatgaacagttaagaagatatatgaatgctagagatgagtctttaggagaa
ggagctccaaagctattctatactaacttttttactggaattttaaatagatataatgct
tatgttggcactataagttcaagttataattactatttagaatggaaagacccatatcca
tttaagcttgaagaagttgaagattataaaaattgtggacaaaatatactcttacaagga
tttttagaaaagaaaaatcttttagatttaatgagaaattttatagtttttgaggcagaa
gatggagttgtaattaaaaaggtttgtagatatcaacaatttagagctgtgaacaaagct
cttaataaaattaaaaatggaaaagataagatttcaagaggtggagttgtttggcatact
caggggtcaggtaaatctttaactatggttttcttagctagaaagattaaaagaacacaa
ggattaacagattctacaatagttatagtaacagatagaattgaccttgataagcaaata
gcaggaacttttgaaagaactttaggtaaaataactactcctgttagagctgatactatt
gataaaatgaaaaaattattatcaaatcctcaaccacaaattataatgactactattcag
aaatttcaaagtgaaactgaagaaaaggaagttatgcttgatggagaaaatttaactcaa
aaatatgctgttgagtaccctgttttaagcacaaaacaaaatattattgtattggctgat
gaggctcatagaagtcaatataaggacaccgcagctaatatgagaaaggcattgcctaat
gctgtttttatcggatttacaggtaccccaatagataaagaggataaatcaacaccaaga
acttttggaggatatatagataaatattctattaaacaagcagtagatgatggtgctact
gttaagattgtttatgaaggtagaagaccagacttacaagtaataggagaatctttagaa
gaattatttgatgaagctttttcagatagaactgatgaagaaaaagaagctattaaacaa
aaatatgccaataaaaaaactgttgttgaatcagaagataggattgatgaaattgctaaa
gatttattaaaacactataaagaacaaatacttcctaatggatttaaagcacagattgta
tgtgtatcaagagaagcttgtgtaaaatattatgatgctttaaatagacatatgaaagaa
atattaggtgaaggatttgaagctcaagtgatattctcaggagataataatgataaacct
cacttaaaaaagcattttactacaaaatcagagcaagaaaagttaataaaaagatttaag
aaacctataaataaggacaagttaacatttttaatagtcaaagatatgttgttaacagga
tttgacgcacctattgaacaagttatgtatcttgatagaccactaaaagaacatacttta
cttcaagctattgcaagggttaatagaacatcaacaagagaagttgagagacaacttgaa
aatggagaaatagtaaaagaaaatattacaaagcaatgtggatacatagtagattattat
ggtatttcaaattacttagaagatgctttagctatatttgataaagaagagctgggtaaa
cctatggaatctttagatgatttatataatgaaatgttatcttatagagaatctataatg
tctatgtttagaggtgtggataaaaataatttagatgctcttgtgaataaaattgagcca
gaagataaaagagctgaatttgaattaatgtatagaaaattctcaggggcagttgaaagt
cttttaccatcacatgttgatacagaaatattaaatgatttgaaatggctatcatatatt
agagcagctgctaaagctaagtttagtccaagtgaatcaatagatatagctgattgtgga
gaaaaagttagagaaataatagaaactcatttaaaatcactaggagttagaagttggatt
gaaccaataacattatttgaaaaagattttaaagataagataaacactctaaaatcagat
gaagctcaagcatctgctatggaacatgcaattaagcatacaattaatattagaagaaaa
gaaaatccagtttattatgcttctctattggaaagacttcaaaagatattagatgaaaca
aaaaatgattggattgaaagaaaaataagattaaataagtttattaagaatcatgttgaa
gatggagctgctaatgaggctagtgatttaggactagatgagaaagagtttgcgttcttt
aaagtagtaaaaaaatacttagaagatggtggagaagaattcatagctaaggaagaaaaa
gcatgttatatatcagatgaaacagtagaactttcaaagcaaattgctaaagaagttaaa
gaaattgctgaaaatgcaggaatcgattgggttacaactccgtataaaactaataatgtt
gaaagagaaataaagttaatgctaattagaaaatatgctaagaaaattcctagaaatatt
agagaaaaattaatggaaccacttctaaatttagccaagatacattttgatatagtttaa

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