Clostridium perfringens ATCC 13124: CPF_2897
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Entry
CPF_2897 CDS
T00378
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00220
Arginine biosynthesis
cpf00240
Pyrimidine metabolism
cpf00250
Alanine, aspartate and glutamate metabolism
cpf01100
Metabolic pathways
cpf01110
Biosynthesis of secondary metabolites
cpf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CPF_2897 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CPF_2897 (carB)
00220 Arginine biosynthesis
CPF_2897 (carB)
Enzymes [BR:
cpf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CPF_2897 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_4
PTE
HTH_23
Usp
DUF7626
Motif
Other DBs
NCBI-ProteinID:
ABG84100
UniProt:
Q0TM79
LinkDB
All DBs
Position
complement(3167173..3170376)
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AA seq
1067 aa
AA seq
DB search
MPLNKDIKKVLVIGSGPIIIGQAAEFDYSGTQACQALKEEGIEVVLVNSNPATIMTDKEI
ADKVYLEPLTVEFVEKVIEKERPDSLLAGMGGQTGLNLAVELYEKGILDKYNVKVIGTSI
ESIKEGEDRELFRDMMNRINQPVIQSEIITDLDAGIAFARKIGYPVIVRPAYTLGGTGGG
IANNEEELIETLTSGLQLSTIGQVLLEKSVKGWKEIEYEVMRDSFGNCITVCNMENIDPV
GIHTGDSIVVAPSQTLSDKEYQMLRSASIDIINAVGIEGGCNVQFALNPHSFEYAVIEIN
PRVSRSSALASKATGYPIAKVAAKIALGYGLDEIKNAVTGMTYACFEPSLDYVVVKIPKW
PFDKFQGADRALGTKMMATGEIMAIGSNFEAAFLKGIRSLEIGKYSLEHKKFKDLSMYEL
RERVVSPDDERIFALAEMLRRGYRIDMVSKITGIDIFFLEKFRWLVEEEQKLKQSTIDDL
NREWLLKLKRRGFSDKAIADMLKVSPDEIYRLRDIWHIKPAYKMVDTCGGEFEALSPYYY
STYEQYDEVVVSDNKKVVVIGSGPIRIGQGIEFDYASVHCVMALRKQEIETIVINNNPET
VSTDFSISDKLYFEPLTEEDVLNIIDKEKPDGVILQFGGQTAIKLAKFLKEKNIPTLGTT
SDQIDLAEDREQFDDLLERLNIARPKGKGVWSLEEGLEEARRLGFPILVRPSFVLGGQGM
EITHDEEELTYYLTNAFEKDSKNPILIDKYLMGREIEVDAISDGEDVLVPGIMEHLERAG
VHSGDSITMYPAQNISDKIKEDVLDYTKKLALSIGIKGMINIQFIEFEGKLYVIEVNPRA
SRTVPYISKVSGVPIVDIATRIMLGERLKDLGYGTGVYKEPDLVSVKVPVFSTQKLPNVE
VSLGPEMRSTGEVLGVGRNVFEALYKGFVGASMYTGDKGKTILATIKKHDKKEFMELAKD
LDKLGYNFIATTGTAKELREAGIDAKEVRRIGEESPNIMDLIKNKEIDLVVNTPTKANDS
KRDGFHIRRAAIERNIGVMTSLDTLKALVELQKEGAHNRELEVFNLI
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccattaaataaagatataaaaaaagttttagtaataggttcaggtccaataataata
ggacaagcagcggagtttgattactcaggtactcaagcttgccaagctcttaaagaagaa
gggattgaagttgtacttgtaaactcaaacccagctacaataatgactgataaggaaata
gcagataaggtttatcttgagcctttaacagttgaattcgtagaaaaagtaatagagaaa
gaaagaccagattctcttttagcaggaatgggtggacaaacagggttaaaccttgctgtt
gagctttatgaaaagggaattttagataaatataatgtaaaagtaataggtacttccata
gaatctattaaggaaggggaagatagagaactattcagagatatgatgaatagaattaat
caacctgttattcaaagtgaaataataactgatttagacgctggtattgcctttgctaga
aagattggatatccagtaatagttagaccagcatatactcttggaggaactggtggagga
atagctaataatgaagaagaattaatagaaacattaacatcaggattacaattaagtaca
attggacaggttcttttagagaagagtgttaaaggatggaaagaaattgagtacgaagta
atgagagactcttttggtaattgtatcacagtttgtaacatggaaaacattgaccctgta
ggaatacacactggggattcaatagttgtagctcctagccaaacattatcagataaagag
tatcaaatgcttagaagtgcatcaatagatataataaatgctgtaggaattgaaggagga
tgtaatgttcagtttgctttaaatccacattcctttgaatatgcagtaatagaaatcaat
ccaagggtttcaagatcttcagctttagcttcaaaggcaactggttatccaatagcaaag
gttgcagctaaaatagctttaggatatggattagatgaaataaaaaatgcagtaacagga
atgacatatgcttgctttgagccttcattagactatgtagttgtaaaaattcctaaatgg
ccttttgataaattccaaggagctgatagagctttaggaactaaaatgatggctactgga
gaaataatggccataggaagtaattttgaggcagcatttttaaagggtataagatcatta
gaaataggtaagtattcattagagcataaaaaatttaaagatctttcaatgtatgagtta
agagaaagagtagtttctccagatgatgagagaatatttgctttagctgaaatgctaaga
agaggatacagaatagatatggtttcaaaaataactggaatagatatattcttcttagaa
aaattcagatggttagttgaagaagaacaaaagcttaagcaaagcacaatagatgattta
aatagagagtggttattaaaattaaagagaagaggtttctcagataaggcaatagctgat
atgctaaaggtttcaccagatgaaatctacagattaagagatatatggcatataaagcct
gcttataaaatggttgatacttgtggtggagaatttgaagctttatcaccatactattac
tcaacatatgaacaatatgacgaagtagttgtttctgataataagaaagttgtagttata
ggatcaggtcctataagaataggacaagggatagagtttgactatgcttcagttcactgt
gtaatggcacttagaaagcaggaaattgaaacaatagttataaacaataacccagagaca
gtaagtacagacttcagtatttcagataagctttattttgagccattaactgaagaggat
gttttaaacatcatagataaagaaaagccagatggagttatacttcaatttggtggtcaa
acagctattaaacttgctaagttcttaaaagagaagaacattcctaccttaggaactact
tcagatcaaatagacctagctgaggatagagaacaatttgatgatttattagaaaggctt
aatatagctagaccaaagggaaaaggagtttggagcttagaagaaggcttagaggaagca
agaagattaggattcccaatcttagttagaccttccttcgttttaggtggtcaaggtatg
gaaataactcatgatgaagaagagttaacatactatttaacaaatgcttttgagaaagat
tccaagaatccaatacttatagacaaatacttaatgggtagagaaatagaagttgatgcc
atatctgatggtgaagatgttctagttccaggaattatggagcatttagaaagagcagga
gttcactcaggagatagtattactatgtacccagctcaaaatatttcagataagataaag
gaagatgttctagattacactaagaaattagccttaagcataggaataaagggaatgata
aacattcagtttattgagtttgaaggaaagctttatgtaatagaggttaatccaagagct
tcaagaacagtgccttatatatcaaaggtaagtggagttccaatagtagatatagctacg
agaataatgcttggagaaagattaaaagatttaggatatggaacaggagtttataaggag
ccagatttagtatcagttaaggttccagtattctcaactcaaaaacttcctaatgttgaa
gtaagtttaggaccagaaatgagatccacaggagaagttttaggagtaggaagaaatgtt
tttgaagcgttatacaaaggctttgttggggcttctatgtacactggagataagggtaaa
actatcttagctactattaagaaacatgataaaaaagaatttatggaacttgctaaggat
ttagataaattaggatataatttcatagcaacaacaggaacagctaaggaattaagagag
gctggaatagatgctaaggaagttagaagaataggagaagaatctccaaacatcatggat
ttaataaagaataaagaaatagatttagtggtaaatactccaactaaagctaacgattct
aagagagatggattccatataagaagagcggcaatagaaagaaatataggagttatgact
tcattagatactcttaaagctctagtagaattacaaaaagaaggagcacataatagagag
ttagaagtatttaacttaatataa
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