KEGG   Corynebacterium pseudotuberculosis 316: CP316_01720
Entry
CP316_01720       CDS       T01753                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cpg  Corynebacterium pseudotuberculosis 316
Pathway
cpg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CP316_01720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpg03021]
    CP316_01720
   03400 DNA repair and recombination proteins [BR:cpg03400]
    CP316_01720
Enzymes [BR:cpg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CP316_01720
Transcription machinery [BR:cpg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CP316_01720
DNA repair and recombination proteins [BR:cpg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CP316_01720
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AFB71663
LinkDB
Position
354008..358018
AA seq 1336 aa
MIDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITGVDEEARHSDQTTLEAEMLLEKKDVEADAESEIAERAQKLEED
LAELEAAGAKADARNKVQKAADKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKTEGEIGGQ
GAYQPATEDGPATGVYSSYAEALMARDRGVLGLQAKIRVRISHLRPPVEVEAEQFPEGWE
QGQTWLADTTLGRIMFNELLPWNYPYLEGVMVRKGGGSNKILLGDVINDLAATYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKEEILDRYEAEAAKIERKYWEQGALTERE
RYDRLVELWKEATDEVGNAVEKLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTKQGIRVPVAVEVKDAQGNVTGYTGHSLIETSVAGRVASVDIKDSEGNVLVPAGENL
TDQLIEKLIAAGVAEVKVRSVLTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTL
TINPDDGSDVVVYEKLSKRQGLATVRVPMESNPGAMIERTLSEGDHVNVGDRLLRGPADP
HDVLEVLGRRGVEQHLVDEVQDVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPG
TLVDLSEAKAANAEAIAAGGHPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDSY
GEFTGASVPLDEAYDL
NT seq 4011 nt   +upstreamnt  +downstreamnt
gtgatcgacgtcaacttcttcgacgagctccgcatcggcctggctactgccgacgacatt
cgtcgttggtccaaaggcgaggtcaaaaagccggagaccatcaactaccgcaccctgaag
ccggagaaggacggcctcttctgcgagcgaattttcggcccgacccgcgactgggagtgc
gcttgcggtaagtacaagcgtgtccgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggttcgccgtgaacgcatgggccacatcgaactggctgcgccc
gtcacccacatttggtacttcaagggtgtcccgtctcgtctcggttaccttttggacctg
gctccaaaggatctcgagcgcatcatttacttcgcagccaacatcatcactggtgttgac
gaggaagctcgccacagcgaccagaccactcttgaggcagaaatgcttttggagaagaaa
gacgttgaggctgacgcagagtctgagatcgcagagcgcgctcagaagctggaagaggat
cttgccgagctggaagccgcaggagctaaggccgacgcccgcaacaaggtgcaaaaggct
gcagataaagagatgcagcacatccgcgagcgggctgagcgcgagatcgatcgtcttgag
gagatctggcagacctttatcaagcttgctcctaagcagatgatcattgatgagaccatc
tatgaagaactcgtggatcgttacgaggattacttcaccggtggtatgggcgcggaggcc
atccaaacccttatccgcaactttgacctcgatgctgaggcagaggaactgcgcgagatc
atcaacaatggcaaaggccagaagaagatgcgcgccctcaagcgactcaaggttgttgct
gcattccagcgctcgggcaatgacccagctggtatggtgctcgactgcatcccggtgatc
ccaccggagctgcgtccgatggttcagcttgatggtggccgttttgctacctccgacctg
aacgatctctaccgtcgcgtgattaaccgcaacaaccgcctcaagcgcatgatcgacctt
ggtgctcccgagatcatcgtgaacaacgagaagcgtatgttgcaggagtccgtcgacgcg
ctctttgataatggtcgccgtggtcgtccggtcaccggtcctggcaaccgtccgctgaag
tccttgagcgatttgcttaagggcaagcagggtcgtttccgtcagaacttgctgggtaag
cgtgtcgactactctggtcgttccgttattatcgtcggtccacagctgaagctgcatgag
tgcggtcttcctaagctcatggctcttgagctcttcaagccgtttgttatgaagcgcctc
gtggaaaacgattacgcgcagaacatcaagtcggctaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgttctagaagaggcaatttctgagcatcctgtgatgcttaaccgt
gcacctaccctgcaccgcctaggcatccaggccttcgagcctaagctcgttgagggtaaa
gctatccagctgcacccactcgcgtgtgaggccttcaacgctgacttcgacggtgaccag
atggctgtgcacttgccgctatctgctgaagcacaggctgaggcgcgcatcctcatgctt
gcctccaacaacattctctccccggcatccggtaagccacttgccatgccgcgtctggac
atggtgactggtctttattacctcaccatggacaagactgagggtgagattggtggtcag
ggtgcataccagcctgctactgaggatggtccagcaacgggtgtgtactcctcctacgct
gaggcacttatggctcgcgaccgtggcgttcttggcctgcaggccaagatccgggtacgc
attagccatctgcgtccgccggtagaggttgaggcagagcagttcccagagggttgggaa
cagggacaaacctggttggctgataccactcttggccgcatcatgttcaacgagctcttg
ccgtggaactacccgtaccttgagggcgttatggtccgtaagggtggaggatcgaacaag
attctcttgggcgacgtgattaatgatctcgctgcgacctatccgatgattactgttgct
cagacgatggacaagatgaaggatgccggtttctactgggcaacccgaagcggcgtgacc
atcactatgtctgacgtgctcgttcttcctaataaggaagaaattcttgaccgctatgag
gccgaggctgcaaagatcgagcggaagtactgggagcagggtgctctgacagagcgcgag
cgctacgaccgtctggtcgagctttggaaggaggctaccgacgaggtcggtaatgccgtc
gagaagctctatccggatgacaacccgattcctatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggacgctggccggcatgaagggcatggttgtgaactcaaagggt
gattacatcacccgaccgattaagacttccttccgtgaaggcctgtcggttcttgagtac
ttcaacaactctcacggttcgcgtaagggcctcgccgataccgctctgcgtaccgccgac
tcgggttacctcactcgtcgtctggtggacgttgcgcaggatgttatcgtccgcgaggat
gactgcggcaccaagcagggcattcgtgtcccagtggccgttgaggttaaggatgctcag
ggcaacgtcaccggttacaccgggcacagcctcatcgagacctctgttgctggccgcgtg
gcttccgttgacatcaaggattctgagggcaacgtcctggtaccagctggtgaaaacctc
accgatcagctcatcgagaagctcatcgccgcaggcgttgccgaggtcaaagttcgctcc
gtgcttacctgccagaccccgaccggtgtgtgcgctaagtgctatggcaagtccatggct
accggcaagctcgttgatatcggagaggcagtgggcatcgtcgctgctcagtccattggt
gagcccggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggtgacatc
accggtggtcttcctcgtgtccaggagctcttcgaggctcgtgttcctaagaatcgcgct
ccgattgcttctgtggcaggtaccgtacaccttgaggatgaaggtaacttctacaccctc
accatcaacccagacgatgggtcagatgttgtggtctacgagaagctctccaagcgtcag
ggtcttgctaccgtgcgggttcctatggaatccaacccgggtgccatgatcgagcgcacc
ttgtcagagggcgaccacgtgaacgtgggcgatcgtctgctacgcggacctgctgatccg
cacgacgtacttgaggttcttggccgccgtggtgttgagcagcacctcgtggacgaggtt
caggacgtgtaccgcgcacagggtgtggctatccacgataagcacatcgagatcatcatt
cgtcagatgctgcgccgcggcaccgtcatcgagtccggctcgacagagttccttccgggt
actctcgttgacctttcggaggccaaggccgctaacgctgaggctattgctgctggtgga
catcccgctgagctccgttcggagatcatgggtatcaccaaggcatcgttggctaccgag
tcgtggctgtccgctgcgtccttccaggagaccacgcgtgtgcttaccgacgccgccatt
aacaagcggtccgataagctgatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggcgggtaccggtatttcccgttaccgcaacatctccgtcaaaccgactgaggcagct
cgcaatgcggcttactcaatcccaacgtatggagattccatctatggcgatgacagctac
ggtgagttcaccggcgcttccgtgccactggatgaggcctacgacctctaa

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