Corynebacterium pseudotuberculosis 316: CP316_02870
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Entry
CP316_02870 CDS
T01753
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpg
Corynebacterium pseudotuberculosis 316
Pathway
cpg03420
Nucleotide excision repair
cpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP316_02870
03430 Mismatch repair
CP316_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpg03400
]
CP316_02870
Enzymes [BR:
cpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP316_02870
DNA repair and recombination proteins [BR:
cpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP316_02870
MMR (mismatch excision repair)
Other MMR factors
CP316_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ADDB_N
AAA_11
HHH
DUF6011
Helicase_Sgs1
DZR
Motif
Other DBs
NCBI-ProteinID:
AFB71885
LinkDB
All DBs
Position
593914..595965
Genome browser
AA seq
683 aa
AA seq
DB search
MIDLNELDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVEHVKDRKIPAAADKIAQVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGKRD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLQLEGMRPPGPDPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAVFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRTGTESIRGSALETLVRS
SLAPLGLTPEEPEGTQARERWQSLDALAELTVELTQATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHALKGGEPHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIHAAVPPRTKRSRRCRVCGSPLSTSAENV
MGRCVDCPSGVGEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEACPTTTDELLKI
SGIGQMKAEKYGSSLLEVLAQFH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaacgagttggatagcgatcaaagggctgccgctagtgccccgcgggga
cctgtagctatcctcgcgggcgcgggtacaggtaagactcgaacgattacctatcggatt
gccaatcttattgaccgcggcatggctagccccaaccgcgtacttgcagtgacgtttacg
cgtcgcgctgcgggggaaatgcggcaccgactgggagttatgggggtcgggggtgttcag
gcacagacctttcactcagctgcgatgcgacaactatcgtatttttggccgcaagtggcg
gggaatcttccctggaaactgttggataacaagtttccgctcgttggcaaagcagcgcgc
tcggtaggcatagaaacgacgacggaaaacgtcagagatcttttaggcgagattgagtgg
gcaaaggctacgttaataacgccggaccgttatgtggagcatgtgaaggatcggaagatt
cctgcggccgcagataaaattgcccaggtatatcgcaggtatgagcaggctaaaacaacg
agtgaaggcatgcttctggattttgatgatcttttattgcacacggcaggggccattgag
aattcgactgctatcgcagaggaatttcgggagcagtatcgcacttttgtagtcgacgag
taccaggacgttacgcccctgcaacagagagtgctggatgcgtggctcggtaagcgtgac
gatatcactgtggtgggagacgccaatcagactatttattcttttacgggagcaacccct
aattatcttttggggttttctcgtaaataccctcatgcgaccgtagtcaaactacagcga
gattataggtcgaccccccaagtgacggaccttgccaatacggtcattgggaaggctcgg
ggtcgggtagctggtacccggcttcaattggaaggaatgcgccctcccggtccggacccg
gaattctgcactttcgacgatgaaccggctgaggctcgcgccgtagctagtaggattaaa
gaactcttaaacaagggggttgcagcgtcggaaatcgcggtgctttatcgcatcaacgcg
caatcggcggtttttgagcaggcccttgcagatgccgggatcgtttaccaggtgcgtggt
ggcggagagtttttccagcgcgcggagattcgccaggcaatgtcgcagcttgttcgcgtg
gcccagcgcacgggaacggaatcgatccgaggctctgccctggagaccttggtacgctcg
tcgctagcacctttggggttaaccccggaagaaccggaaggaacgcaggctcgcgaacgg
tggcagtccctagacgcccttgcagagctcactgtagagctgactcaagctacaccggat
ttggatatccaaggactcctagaacagctcaatcagcgtgcaagcgcaaagcacccaccg
acgatgcaaggcgtgactttagcgtctctgcatgcggctaaaggcttggaatgggatgcg
gtgttccttgtggggcttgtagacggcacgcttccgatcactcatgcgctcaaaggaggg
gagcctcatattgaagaggaacgcaggcttttctatgtcggcgtcacccgcgcacgggaa
caccttgtgtgctcgtgggcaaaagctcggcaggaaggaggccgtgcaacgcgcaagcga
agccgattttttgacggcatcgtggaagaacctatccatgccgcagtcccgccgcgtacc
aagcgatcacggcgctgtcgtgtctgtggctcgcccttgagcacgtctgcagaaaacgtg
atgggaaggtgcgttgattgcccatcgggcgtgggcgaggaggtatttgagacactgaag
gcgtggcgtctagacatggccaaagaaggtggcgtacctgcttatatagtctttacagac
gcgaccctgcacgctattgctgaggcctgcccgacgaccaccgatgagctactaaaaatt
tcgggcatcgggcagatgaaagcggagaagtatggcagtagcttgctagaagttttggcc
caatttcattga
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