Corynebacterium pseudotuberculosis 316: CP316_05340
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Entry
CP316_05340 CDS
T01753
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cpg
Corynebacterium pseudotuberculosis 316
Brite
KEGG Orthology (KO) [BR:
cpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpg03019
]
CP316_05340
Enzymes [BR:
cpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CP316_05340
Messenger RNA biogenesis [BR:
cpg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CP316_05340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
IstB_IS21
RecG_N
Motif
Other DBs
NCBI-ProteinID:
AFB72379
LinkDB
All DBs
Position
complement(1142021..1144777)
Genome browser
AA seq
918 aa
AA seq
DB search
MTITPAPHSHLLEFISRQKFPLDDFQLQGCQAVEDDRGVLVCAPTGAGKTIVGEFAVSLA
LSRGTKCFYTTPIKALSNQKFHDLVEVHGAEAVGLLTGDVSINHDADVLVMTTEVLRNMI
YARSEALTRLTHVVMDEIHFLSDKSRGVVWEEAILGLDESVKVVGLSATVSNSEEFGRWL
ETVRGDTEVIVSEHRPVPLNQWMMVGRRIHPLFEPDSGGEVNVRLEEHIDRIEGKEAIDR
GRDQFKSGGFRARSSGKSHSSRPSRPQQDRYRPQGRPEVLDVLQSQDMLPAITFIFSRAG
CEGALYQCMRSSIVLTDQQEAEEIARIVDAGVAGIPEEDLKVLDFRKWRAALMRGFAAHH
AGMLPAFRHIVEELFTKGLVRAVFATETLALGINMPARTVVLEKLVKYNGEAHVDLTPGQ
YTQLTGRAGRRGIDIIGNAVVQWAPAMDPRSVAGLASTRTYPLISTFSPGYNMSVNLLKT
IGFTSAHRLLEKSFAQFQADGSVVDLVRKIERSETRVKDLESQLSSHISEENIEKFLEYI
TLRRELTDEERRAKRHSFEQRETEVTKVLASLNLGDVIAMPGKKRPLLAVVVQPSNNSSD
PKPWVTMESGWSGRVDTAAFPMPPVVVGHMKLSRATIAQPRKNSKYVVRQFEKLTYSRPK
RLKPQHRNRPTEKITALRARIRSHPAHQWDNREDLARIGEKLARAQKETSQLRTTVETAT
DTLGKTFDRILGLLGELDYVEFIDAIPRVTEEGENLAKIHNESDLLVAQCLKRGIWDDLD
PAELAGVVSMCTFENRKETRGEPEAATESMALAMNNTLRLWDELSVNERRYQLPVTKYPE
AGFSLAMHQWTAGAPLGYCLAAAAESGAELTAGDFVRQCRQVIDLLEQIRSTAYSKETRK
SARSAIEAIRRGVVAIGN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgacgattacgccagcccctcattctcatctcctagagttcatctctcggcagaagttt
cccctcgatgatttccaacttcagggatgccaagccgttgaagatgaccgtggggtttta
gtatgcgcgcctacgggggcaggcaaaactatagtcggggagtttgccgtctctttggcc
ctttcccgtggtactaagtgtttttacaccacaccaatcaaagcgcttagtaatcagaaa
tttcatgacttagttgaagttcatggcgcagaagccgttggcttgctcactggcgacgtt
tctatcaatcatgatgcagatgtccttgtgatgaccactgaagttctccgaaatatgatc
tatgcccgatcagaggctttaacccggcttacccacgtagtcatggatgagatccatttc
ctgtctgataagtcccgcggtgtagtatgggaagaggcaattcttggtcttgatgaatct
gtcaaggtagtcggtttatctgccaccgtcagcaactcagaagaattcggtcgctggctg
gaaacggtacgaggagacaccgaggttatcgtttctgagcacaggccagttccgctgaat
cagtggatgatggtgggacgccgtattcatccgttgtttgaaccggattcaggcggtgaa
gtgaatgttcgactcgaggagcacatcgatcgcatagaggggaaagaagcaattgatcga
ggacgcgaccagttcaagtccggaggcttccgtgctcgctcatccggaaagtctcatagc
tcacgtccaagccgcccacaacaagatcggtaccgcccacaaggacgaccagaggttctc
gatgttttgcaaagtcaagacatgcttccggcaatcactttcatattttcccgtgctgga
tgcgaaggcgcgctatatcaatgcatgcgctccagcatcgtgctcacggaccaacaagaa
gcagaagaaatcgcccgtatcgttgatgctggggtagcggggattcccgaggaagacctc
aaagttcttgatttccgcaagtggcgggctgcgttgatgcgtggtttcgccgctcaccat
gctggaatgctgccggcttttagacacatcgttgaagagctttttactaaaggtctcgtc
cgcgctgtttttgccacggaaaccctcgcactcggcattaatatgccggctcgtaccgtg
gttctagaaaaactggtcaaatacaatggtgaggcgcacgtagacctcacgcctggtcaa
tatacacagctaacgggccgtgcaggccgtcgtggcattgatattatcggaaatgctgta
gtccaatgggctcccgcaatggatcctcgctctgtcgctgggctcgcgtccactcgaaca
tatccacttatctcaaccttttcacccggctacaacatgtcggttaatttacttaaaacc
attggttttacctcggcgcaccgacttttggaaaaatctttcgctcaattccaagcagat
ggaagcgtagtagacctcgtgcggaaaatagagcgctcggaaacgcgcgttaaagatctt
gaatcgcagctcagcagtcatatatctgaagagaatattgagaaatttttagaatatatc
acgctcagacgcgaacttacagatgaagaacgtagagcaaaaaggcactcatttgaacag
cgggagacggaagtcaccaaggtgttggccagccttaatctcggagacgtgattgctatg
ccaggcaaaaaacgcccgctattagccgtagttgtacaaccctctaataattcttctgac
cctaaaccttgggtgaccatggaatctggctggtcaggaagagtggatactgccgctttc
ccgatgcctccagtggtagtaggtcatatgaagctctctcgtgccacgattgcccaacct
cggaaaaactccaagtatgtggtcagacaatttgaaaaactcacgtattcccgcccaaag
cgtctcaagcctcagcaccgtaatcggcctacagaaaaaatcactgcacttcgcgctcgc
atacggtcccacccagcccaccagtgggataatagggaagacctcgcaaggataggagaa
aaactcgcacgtgcacagaaagagacatctcaattacgtactacggtagaaacagccacc
gataccctgggaaaaacttttgatcggattctagggctgctaggagaacttgattatgtc
gagtttattgatgccatcccacgggtaacggaagaaggcgaaaacctagcgaaaattcac
aacgaatcggacttgttagtagctcaatgcctcaaacgtggaatctgggatgacctcgac
cccgcagaacttgctggtgttgttagcatgtgcacatttgaaaatcgtaaagaaacacgt
ggtgaaccagaggctgcgacagagtctatggccttggccatgaacaatacgctgaggctc
tgggatgagctcagtgtgaatgaacggcgctaccaattgcctgtaaccaagtacccagaa
gccggtttttctctagctatgcatcaatggactgctggtgcgcctcttggttattgtctc
gctgctgcagccgaatcaggggccgagctcaccgcaggagattttgtgagacaatgccgc
caagttatcgatttactcgaacaaatcaggtcaactgcttatagcaaagaaacaagaaag
tcagctcgatctgccattgaagcaatacgacgcggtgtggtcgccatcggcaactag
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