Corynebacterium pseudotuberculosis 316: CP316_06065
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Entry
CP316_06065 CDS
T01753
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cpg
Corynebacterium pseudotuberculosis 316
Pathway
cpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP316_06065 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpg03400
]
CP316_06065 (ruvB)
Enzymes [BR:
cpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP316_06065 (ruvB)
DNA repair and recombination proteins [BR:
cpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP316_06065 (ruvB)
RecFOR pathway proteins
CP316_06065 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
nSTAND3
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
RNA_helicase
AAA_3
Rad17
NTPase_1
MCM
Sigma54_activ_2
AAA_25
Resolvase
AAA_18
AAA_19
Zeta_toxin
TsaE
NACHT
Motif
Other DBs
NCBI-ProteinID:
AFB72527
LinkDB
All DBs
Position
complement(1310548..1311645)
Genome browser
AA seq
365 aa
AA seq
DB search
MANIEKTEFNIVPSGGQVSETGRPKNAPVDARQQAGENDAETTLRPRSIEEFIGQPKVRG
QLNLVLTGAKKRGVTPDHVLLSGPPGLGKTTMAMIIAYELGTSLRMTSGPALERAGDLAA
MLSNLMEGDVLFIDEIHRMARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLELAPFTLVG
ATTRSGMLTGPLRDRFGFTAQMEFYENSDLTKVVLRAAKILGVTIDDAAAIEIASRSRGT
PRIANRLLRRVRDFAEVHSDGHIDVEAARSALVVFDVDEKGLDRLDRAVLEALIKSHGGG
PVGVNTLAIAVGEEPSTVEEVCEPYLVRAGMITRTGRGRVATAAAWRHLGLVPPEGLAHF
GDESS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacatagaaaagacagaattcaatattgttccgtctggaggccaggtttctgag
accggtaggcctaaaaatgccccggtcgatgctcgtcagcaggctggcgaaaatgatgca
gagacaacactgcggccgagaagcatcgaggagtttatcggacagcctaaagttcgggga
caacttaaccttgtgctgacgggtgcaaaaaaacgtggtgttactccagaccacgtgctg
ctgtctggcccacctggtttgggaaaaacaacgatggcaatgatcattgcctatgagttg
ggaacgagcctaagaatgacctcggggccggcgttggagcgagccggagatctggcagcg
atgctgtctaacctgatggaaggcgacgtgctttttatcgatgaaattcacaggatggcg
cgtcctgcagaagagatgttgtacatggcaatggaggattttcggatcgatgtgatcgtg
ggtaaggggccaggggccacatcgattccgttggaactagcgccgtttacccttgtaggt
gctacgactcgctccgggatgctcacaggtcctttgcgggatcgtttcggtttcactgca
caaatggagttttatgaaaattctgacctgactaaggttgtgctgcgtgctgctaagatc
cttggcgttaccatcgatgatgcggcggcaatcgagatagcttcgcgttccaggggaacg
cctcgtatcgctaaccggcttttgcgccgggtgcgggattttgcagaggttcactccgat
gggcatatcgatgtggaggctgcgcgttcggctttagttgtgtttgacgtggacgaaaaa
gggcttgatcgtctagaccgggctgttttggaggcgcttattaagagccacgggggaggg
cctgtgggagtaaacacactggcaatcgccgtgggagaagagccctcgacggtggaagaa
gtgtgtgagccgtacctagtacgcgcaggaatgataacgagaacagggcgggggcgcgtt
gccactgctgcagcctggcgtcatttaggattagtgcctccggaaggcctggcacatttt
ggtgacgagtctagttag
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