Corynebacterium pseudotuberculosis 316: CP316_07100
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Entry
CP316_07100 CDS
T01753
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpg
Corynebacterium pseudotuberculosis 316
Pathway
cpg03030
DNA replication
cpg03430
Mismatch repair
cpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP316_07100 (dnaE)
03430 Mismatch repair
CP316_07100 (dnaE)
03440 Homologous recombination
CP316_07100 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpg03032
]
CP316_07100 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpg03400
]
CP316_07100 (dnaE)
Enzymes [BR:
cpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP316_07100 (dnaE)
DNA replication proteins [BR:
cpg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP316_07100 (dnaE)
DNA repair and recombination proteins [BR:
cpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP316_07100 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AFB72730
LinkDB
All DBs
Position
complement(1531533..1535093)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKKSSFVHLHNHTEYSMLDGMAKVDMLAEEVLRQGMPAVGMTDHGNMFGSDAFYRTMKK
AGVKPIIGIEAYMAPDSRFNKTRVRWGEPHQKSDDVSASGAYLHQTMLAENAEGLRNLFY
LSSMASYEGQLGKWPRMDADLIAEHASGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMREMWDSLVPEACDNTLWIAERVQDYGEIWEEH
THDRMPIADVPEGHTPTSWLRHEVLEGLRVRFNGGEVPQSYIDRAEYEISVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHDLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARVQYGQPGYQIADR
ITKELPPAIMAKDIPLSGIMDPEHPRYGEAGEVRNLIETDPDVKKIYDTARGLEGVVRQA
GVHACAVIMASVPLLEHIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDC
IENIKINRKKTVDLEELTTDDPKVYELLSSGDTLGVFQLDSGGMQELLKRMQPTAFHDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELDEPLREILDETYGLIVYQEQIMRI
SQKVANYTAGEADGFRKAMGKKQPEVLAKQYDKFLEGMLSNGYSKGAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLGISVLS
PDVNESRLNFLPVGNDIRFGLGAVRNVGEDVVNSIVKARQEKGGFSDFSDYLDKIDTVAC
NKRVTESLIKAGAFDSLGHPRKGLLLIHEDAVDSVISTKKAADKGQFDLFAGFGGDDASM
GNAFAVQIPEAQWDRKHQLALEREMLGLYVSGHPLDGYEEALDAQTDTQLTTILAGELRN
GAEVQIGGIISSVDRRYSKKDGSPWAIVTIEDHHGAQVDLLVFNKIYAIVGPQIVEDNII
LAKAHVSIRDDRMSLFCDDLKVPDLGPGNGAGLPLRLTMRTEQCTMANIARLKDVLANNK
GDSDVYLNIVHGDEATVMILGEHLRVNRTASLMGDLKATMGPGILS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaatcctctttcgtacatctgcataatcacactgagtattcgatgctcgac
ggcatggcgaaagtggatatgcttgcagaagaagtccttaggcagggaatgccagctgtg
ggaatgacagatcacggcaatatgtttggatcggatgctttttaccggaccatgaagaaa
gccggagtaaaaccgattattggcatcgaggcttatatggccccggattcccgattcaat
aaaactagggttcggtggggtgaaccacaccagaaatctgatgatgtttcagcttccggt
gcatatttgcaccaaactatgttggcggaaaacgctgagggtctgcgtaacctcttctac
ctgtcttcgatggcctcgtatgaaggccaactgggtaagtggccgcgaatggatgcggac
ctgatcgccgaacatgcctcagggattatcgcgaccacggggtgcccctctggggacgtc
cagacgcgcttgcggctaggccaatttgatcaggcgttggaagccgctgccatgtggcag
gacatttatggcaaagaaaattatttcttggagctcatggatcatggcctggaaatcgag
aatcgggttcgctcggagttgctagagattgggcggaagcttgatctcccaccattagtt
accaatgactgccactatgttttggaatctcaagcgccggcccacgaggccatgttgtgc
gtgcagacaggaaaaactttgagcgatcctgatcgctttaagtttgacggttccggttat
tacatcaagaccgcggagcagatgcgagagatgtgggattctcttgtgccagaagcctgc
gataatactctgtggattgcggaacgagtccaggattacggtgaaatctgggaggaacac
actcacgaccgtatgcctatcgcagacgtgccggaggggcatacaccaacctcttggttg
cgtcatgaggtcttggaaggcttgcgcgttcgattcaatggcggggaagtcccgcagtct
tatatcgatcgtgctgaatacgagatctcagtgattgatatgaagggctatccttcttac
ttcctcatcgttgctgagctgattaaacatgcccgatcaattggcattagagtagggcct
ggtcgtggttctgccgcaggcgccttggtggcatatgcgttgaccattaccaatattgat
ccgatggaacatgatcttctctttgagaggttcttgaacccggagcggccttccgcacct
gatatcgatatcgactttgacgatcgtcgccgtggcgagatgattcgttacgcagcagat
cgctggggagaggacaagatcgcccaggtgatcaccttcggaacggtgaaaactaagcag
gccatcaaagattcagctcgtgtgcagtatggtcagcctggttaccagatcgccgatcgt
attactaaagaacttcccccagcaattatggcgaaggacatcccgctgtccgggattatg
gaccccgagcatcctcggtatggggaagccggagaagtccgaaaccttattgagacagat
ccagatgttaaaaaaatctatgacactgctcgtggattagagggagtggtgcgccaagca
ggcgttcatgcttgcgccgtgattatggccagcgtgccgttgctggaacatatacctatg
tggaagcgcgcggcagacggcgcgttaatcaccggatggccatatcctgcctgtgaggct
attggcctgcttaagatggacttcctggggttgcgtaacctcacggttatcggcgactgc
attgaaaacatcaagatcaacaggaaaaagacggttgatcttgaagagctcaccacggac
gaccctaaagtgtatgagctgctgtccagcggtgatactctcggcgttttccagctcgac
tcgggcggtatgcaagagctactcaaacgaatgcagcccacggccttccatgacattgtg
gcgtctttggctttgtatcgtcctggccccatgggcgtgaatgcacactgggattatgcg
gatcgcaagaatggccgtaagcccattgagccgatccaccctgaactcgacgagccgctg
cgcgagattcttgatgagacctatggcctcatcgtttatcaagagcagatcatgcgtatt
tcccagaaggtagctaattacacagctggtgaagccgacggtttccgcaaggcgatgggt
aagaagcagccggaagtgctggctaagcaatatgacaaattcctagaaggaatgttgtcc
aacgggtactccaagggagccgtggatgcgttgtggggcaccatcgagccctttgcctct
tacgcgttcaacaaatctcacgccgcaggatatggtctcgtttcttactggactgcgtat
ctgaaagccaactacacagctgaatatatggcggcactgctcacatctgttgcggataaa
aaggacaagtctgccatttatctgtctaactgccgacacctgggtatatcggtgctctca
ccagacgtcaacgagtctcgtttaaacttcctccccgtaggaaacgatattcgctttggt
ttaggagccgtgcgtaacgttggcgaggacgtggttaactccattgttaaagcgcgtcag
gaaaagggcgggttctcagatttctcggattatctggataaaatcgatacggttgcttgt
aataaacgcgtgacggagtctttgattaaagccggagcgtttgattccttgggacacccg
aggaaaggcttgttgctaatccacgaggacgcagttgattccgtgattagcactaaaaaa
gctgcagacaaagggcagtttgaccttttcgccggatttggcggtgatgatgcctcgatg
ggcaatgcttttgccgtgcaaattccagaagcccaatgggatagaaagcaccagctggct
ctggaacgggagatgcttggactgtatgtttccgggcatccgctcgatggttacgaggaa
gcacttgatgctcagacagatacgcagctgacaacgatccttgccggtgagttgcgcaat
ggcgcagaggtacaaattggcggcattatttcgagcgtggatcgtcgttactctaagaaa
gacggctctccgtgggcgatcgtaaccattgaggaccaccatggtgctcaggtagatctg
ttggtgtttaacaagatctatgcgatagttggcccccagatcgtagaagacaacatcatt
ttggctaaggcacatgtctcgatccgagatgatcgtatgtccctcttctgcgatgacctc
aaggtacctgacttgggacccggtaacggggcaggactgcctcttcgtctgaccatgcgc
acggaacagtgcactatggcaaatattgcacggttgaaagacgtgctggctaataacaag
ggtgactctgacgtgtatctcaacatcgtgcatggcgacgaggccacagtgatgattctt
ggggaacatttacgggtgaaccgcaccgcaagcctaatgggtgatctgaaggccacgatg
gggccgggaatcctcagctag
DBGET
integrated database retrieval system
