Corynebacterium pseudotuberculosis 316: CP316_10550
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Entry
CP316_10550 CDS
T01753
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpg
Corynebacterium pseudotuberculosis 316
Pathway
cpg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP316_10550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpg03400
]
CP316_10550
Enzymes [BR:
cpg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP316_10550
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP316_10550
DNA repair and recombination proteins [BR:
cpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP316_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DUF7550
Motif
Other DBs
NCBI-ProteinID:
AFB73377
LinkDB
All DBs
Position
2291961..2292782
Genome browser
AA seq
273 aa
AA seq
DB search
MMDSMPEGHVIHRLARELNKHFQGKAPRVTSPQGRFTAEAALIHSTPFYQAHAWGKHLFI
EFDAPTPERIVHIHLGLIGSLHFDPIEETKGQIRLRIEGDKVAANLRGPQWCRLITTEEM
EIAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGIS
PFTPGREVENLDQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDHGGEVYVYR
RLGQPCYVCGTPISGQVMEGRNLFWCPTCQPRP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcatgccagaaggccatgtcatccaccggctcgcccgcgagctcaacaag
cattttcaaggaaaagcgccacgcgtcacatcccctcagggaagattcaccgcagaagca
gcacttatccactccactccgttttatcaggcccacgcatggggcaagcatcttttcatt
gaattcgatgcccccacgccagaacgcattgtgcatatccacttaggactgatcggaagc
ctgcattttgacccgattgaagagaccaaggggcagatccgactacggatagagggtgac
aaagtagcagcaaatctacggggaccgcagtggtgtcgccttattacgacggaagagatg
gagatagccgtcggcaagcttggtgcagacccgctgcgcccagactcagacctaagcctc
gtttgccagcgtgtcgcgcgttcacagagatcgatcggatcgttgctcatggaccagcgg
ctttttgccggcgtggggaatatctaccgtgcggaatcgctctttcgcctggggataagc
ccctttacgcccggccgcgaagtggaaaaccttgaccagatatgggaagacttggtttac
ctcatgcaggagggggtgcgggtagggcgcatcgataccgtccgtcctgaacacactcct
caagccatgggccgagcaccccgtaaagacgaccatggcggagaggtctatgtgtatcgt
cgattgggccagccctgttatgtgtgcggcacgcctatcagcgggcaagtaatggagggc
cgaaacctcttctggtgtcccacctgccagcctcgaccatag
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