Chlorobium phaeobacteroides DSM 266: Cpha266_0109
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Entry
Cpha266_0109 CDS
T00439
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cph03032
]
Cpha266_0109
03400 DNA repair and recombination proteins [BR:
cph03400
]
Cpha266_0109
Enzymes [BR:
cph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cpha266_0109
DNA replication proteins [BR:
cph03032
]
Prokaryotic type
DNA Topoisomerases
Cpha266_0109
DNA repair and recombination proteins [BR:
cph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cpha266_0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_NUD
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABL64179
UniProt:
A1BCQ2
LinkDB
All DBs
Position
complement(126637..129036)
Genome browser
AA seq
799 aa
AA seq
DB search
MALKSPAASARNRTLIVVESPSKAKTINKYLGDKYTVFASVGHIKDLPKKEIGLDFDHHY
EPRYEVIAGKEKVVRQLKKLADESNEILIATDPDREGEAIAWHIANEVEFAHKPVFRVLF
NEITKTAIIAAIQQPRQIDYRLVRSQQTRQGLDKIVGYKISPFLWNVVLRGLSAGRVQSV
ALRLICEREAEINGFQIQEYWSIAADFKTDLNETFRTKLIKIKGDKPELSNQKKAETAAA
EISERLFAVKEITTRVQQRKPPFPFTTSLLQQAASNQLGFGSQKTMRIAQQLYEGIELGD
EGATGLITYMRTDSIRIGTEATAEARNYITAQFGKEYVGYGGAAKAGKNAQDAHEAIRPT
SLLRKPESVKHFLSSDQFRLYELIWRRLLTAMMAPAKIEQTRVDVEDREKEFTFRANGSR
VLFAGFMRVYDDQQELDYEAQSSTRDDVEKEQTVQLPEKLKEQDKLGLAGLDSKQSFTRP
PARYSEATLVKDLDNYGIGRPSTYASIFSTLQDRRYVELQKKKIIPTELGKDVSLILVAN
FPELFNVGFTAHMEDELDKVASGDDEYEAVLEKFYRPLETALSLRKSDPIIPQNSATETC
DKCGKGQMTVKWTASGKFLGCSRYPSCKNIKPLSSSKAKPKDTGIQCPSCKEGHMLLRDG
RLGPFLACSSYPKCNTLLNLGKQRQVEPMKIPPLLTTLVCPKCGAPMNLRSGKRGLWLGC
SKFPKCRGRLAWGTLDEEVQRHWETLMTEHQKAHPTVALTMIDGRPVPLTLSVDDIITRA
EEAGLIAAVPEEQQELTAE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaaatccccggcagcctcggcaagaaacaggactcttattgttgtcgagtct
ccatcaaaggcaaaaacaatcaacaaataccttggggacaaatataccgttttcgcttcg
gtcgggcacatcaaggatcttccgaaaaaagagatcggacttgatttcgatcaccactat
gaaccacgatacgaagtcattgcaggaaaagaaaaagttgtccggcagctcaaaaagctt
gccgatgaatccaacgagatcctgatcgcaactgaccctgaccgcgaaggcgaagcgatt
gcctggcatattgccaacgaagtggaatttgcccataaaccggtattccgggtgctgttc
aatgaaatcaccaaaacagccattatcgccgctatccagcaacctcgccaaatcgactac
cgccttgtccgctcccagcagacgcgacagggtctcgataaaatcgtaggatacaagatc
agcccctttctatggaatgttgtcttgcgcggactctccgcaggaagagttcagtctgtc
gcattacggttgatctgtgaacgcgaagccgaaatcaatggatttcagatccaggagtac
tggagcattgccgctgactttaaaaccgatctcaacgaaaccttccggacaaagctcatt
aaaataaagggcgacaaacccgagctttccaatcagaaaaaagccgaaaccgctgcggca
gaaatcagtgaacgcctgtttgccgtaaaggagataacgacaagggtgcaacagcgaaag
cccccgtttccctttaccacctcgcttcttcagcaggcggcctcaaaccagctcgggttc
ggatcgcagaagaccatgcggattgcccagcagctctatgaagggatcgagcttggcgac
gaaggcgcaaccggtctgatcacctatatgagaaccgactcaatcagaataggaacagaa
gcgaccgccgaggcaagaaactatatcaccgctcaattcggcaaggagtacgtcggatac
ggaggcgctgcaaaagcgggcaaaaacgcgcaggacgcccatgaggcaatccgtcccacc
tcgctgttacgaaaaccggaatcggtcaaacacttcctttcaagcgatcagttccgactg
tacgaactgatctggaggcggctccttaccgccatgatggctcccgcaaaaatagaacag
acaagagtcgatgtcgaagatcgtgaaaaagagttcaccttcagagccaatggcagcagg
gtgctttttgccggattcatgcgggtttatgacgatcagcaggaactggattatgaagct
cagtcctcaacgcgcgacgatgttgaaaaagaacagactgttcagctccccgagaaactg
aaggaacaggacaagcttggtctcgcaggccttgacagcaagcagagcttcacccgacct
cccgcccgatacagcgaagcaacgctcgtcaaggatctggacaactacgggatcggacgc
ccgtcaacctatgcatcgattttttcaaccctgcaggatcgacgctatgttgagctgcaa
aagaaaaaaatcataccgacagagcttggcaaggatgtctcgcttattcttgtggcaaat
tttcccgaactgttcaatgtcggcttcacggcacatatggaggacgagcttgacaaagtt
gcttccggagacgatgagtacgaagctgtgctcgaaaaattctatcgaccgcttgaaacg
gcattgagtctgagaaaaagcgacccgatcattccccagaacagtgcgaccgagacctgc
gacaaatgcggaaagggacaaatgaccgtaaaatggacggcaagcggaaaatttctcggc
tgttcgcgctacccttcatgcaaaaacatcaagccgctgagctcatcgaaagcaaaaccg
aaagataccggaatacagtgtccctcctgtaaagagggacatatgctgctccgagacgga
agactcggcccttttcttgcctgctccagctatccgaaatgcaatacgctgctcaatctc
ggcaaacagcgccaggtcgaaccgatgaaaattcctccgctcctcaccacccttgtctgc
ccgaaatgcggagctccaatgaacctcagaagcggaaaaagaggactatggctcggatgc
tccaagttcccgaaatgccgcggacgacttgcctggggaaccctggatgaggaggttcag
cgccactgggaaaccctgatgacagagcatcaaaaagcccatccgacagttgcgctgacc
atgatagacgggcgtccggtaccgctcaccctttcggttgacgatatcatcacccgagcc
gaagaggccggacttattgccgccgtaccggaagagcagcaggagctcacagcagaataa
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