Chlorobium phaeobacteroides DSM 266: Cpha266_0234
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Entry
Cpha266_0234 CDS
T00439
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Pathway
cph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cpha266_0234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cph03021
]
Cpha266_0234
03400 DNA repair and recombination proteins [BR:
cph03400
]
Cpha266_0234
Enzymes [BR:
cph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cpha266_0234
Transcription machinery [BR:
cph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cpha266_0234
DNA repair and recombination proteins [BR:
cph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cpha266_0234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Redoxin
Motif
Other DBs
NCBI-ProteinID:
ABL64301
UniProt:
A1BD24
LinkDB
All DBs
Position
260535..265013
Genome browser
AA seq
1492 aa
AA seq
DB search
MIFSQGASPLKGDFSKIKFSIASPESILAHSRGEVLKPETINYRTFKPERDGLMCEKIFG
PTKDWECYCGKYKRVRYKGIICDRCGVEVTTKSVRRERMGHISLAVPVVHTWFFRSVPSK
IGALLDLSTKELERIIYYEVYVVINPGEPGAKQGIKKLDRLTEEQYFQIITEYEDNQDLD
DHDSDKFVAKMGGEAIRLLLKSIDLNETAIHLRKVLKESSSEQKRADALKRLKVVEAFRK
SYEPQKKTRKKAVGLFPEDELPEPYVFEGNKPEYMVMEVVPVIPPELRPLVPLEGGRFAT
SDLNDLYRRVIIRNNRLKKLIDIRAPEVILRNEKRMLQEAVDALFDNSRKANAVKTGESN
RPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKSMAIELFQPFV
IRRLVERGIAKSVKSAKKLIDKKDQVVWDVLEKVIDGRPVLLNRAPTLHRLGIQAFQPVL
IEGKAIQIHPLVCTAFNADFDGDQMAVHVPLSQEAQLEAALLMLSSHNLILPQSGKPVTV
PSQDMVLGMYYLTKSRPGDPGEGRIFYSDEDVLIAYNEDRIGLHAQIFVHFNGAVDQKFD
PLRVLDTIVDPKSEKYTWLKSQLEKKTILLTTVGRVIFNQNVPDSIGFINRVIDKKVAKE
LIGRLSSDVGNVETAKFLDNIKEVGFHYAMKGGLSVGLSDAIVPDTKVRHIKNAQKDSTK
VVKEYNRGTLTDNERYNQIVDVWQKTSNIVAEESYQKLKKDREGFNPLYMMLDSGARGSR
EQVRQLTGMRGLIARPQKSMSGQPGEIIENPIISNLKEGLTVLEYFISTHGARKGLSDTS
LKTADAGYLTRRLHDVAQDVIVTIEDCGTTRGLHVYRNIEEETSGQIKFREKIRGRVAAR
DIYDTLNNNVIVKAGEIITEELGDLIQETAGVEEAEIRSVLTCESKIGICSKCYGTNLSV
HQIVEIGEAVGVIAAQSIGEPGTQLTLRTFHQGGTAQGGISETETKAFYEGQLEFEDLKT
VEHSAITEDGVEEIRIIVVQKNGKINIVDPDSGKILKRYVVPHGAHLHCNAKALVKKDQV
LFSSEPNSTQIIAELHGRVKFADIEKGVTYKEEVDPQTGFAQHTIINWRSKLRANETREP
RVLIIDESGEVRKNYPVPIKSNLYVEDGQKIVPGDIIAKVPRNLDRAGGDITAGLPKVTE
LFEARIPSDPAIVSEIDGYVSFGSQRRSSKEIKVKNDFGEEKVYYVQVGKHVLANEGDEV
KAGDAMTDGAVSPQDILRIQGPNAVQQYLVNEIQKVYQINAGVEINDKHLEVIVRQMLQK
VRVEEPGDTELLPGDLIDRSAFVEANNNVAEKVRVTEKGDAPSRIQEGQLYKTRDITKLN
RELRKNSKNLVAFEPALQATSHPVLLGITSAALQTESVISAASFQETTKVLTDAAVAGKI
DYLAGLKENVIVGKLIPAGTGLKRYRNLTLTGESVETISHDASDDASTQNGI
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgattttttcacagggagcatcgccgttaaaaggtgatttttcaaagataaagttcagc
atagcgtccccggaaagtattcttgcccattcaagaggagaggtgctcaaaccggagacg
atcaactatcgtaccttcaagccggaaagagatggtttgatgtgcgagaaaatatttggt
cccacgaaggattgggagtgttattgcggtaaatataagagagtacgctataaaggcatt
atctgcgaccggtgcggtgtagaagttacgaccaaaagcgttcgccgagagcgtatgggg
catatatctcttgcggttccagtagtccatacctggtttttccgctctgttccgagcaag
attggcgcattgctggatctgtcgacaaaagagcttgaacgaatcatctattacgaggtc
tatgttgttatcaatccgggtgagcccggggcaaaacagggcataaaaaagcttgatcgg
ctcacggaggaacagtacttccagattattacggagtatgaggataatcaggatcttgat
gatcatgattccgacaagtttgtagcaaaaatgggaggcgaagcgattcgacttcttttg
aagagcattgatctcaacgagacggctattcatcttcgcaaagtcctcaaggagagtagt
tcggaacaaaaaagagcagatgccctcaagagactgaaggtcgtcgaggcattcagaaag
agctacgagccacagaagaagacaagaaaaaaagctgtcggactttttcctgaagatgaa
ctgcccgagccctatgtttttgaagggaacaagccggaatatatggttatggaggttgtg
ccggtcatccctcccgagttgcgcccgcttgttcctcttgaaggaggacggtttgcgacc
tcagatcttaacgatctgtacagaagggtgattattcgcaacaaccggctgaaaaaatta
attgatattcgcgctccagaggttattctccgaaacgagaagaggatgctgcaggaagcc
gtagacgctctgttcgacaattcccgtaaggcaaatgccgtgaaaacgggagagtccaat
cgtccgctgaagtcgctttccgacgccttaaaaggcaagcagggtcgtttccgtcagaac
ctgctcggtaaaagggttgactattcagggcgttcagttattgtggttggaccagagttg
aaactgcacgaatgcggtttgccaaaaagcatggccatcgaactgtttcagccgtttgta
atacgcaggcttgtagagcgcggcattgccaaatcggttaaatccgctaaaaagctgatc
gacaagaaagatcaggtggtctgggatgtgctcgaaaaagttattgatggcaggcccgtt
ctgctgaacagggcgccgacgctgcaccgtcttggcattcaggcgtttcagccagtgctt
atcgagggaaaggccattcagattcatccgctggtttgtaccgcgttcaacgccgacttt
gacggtgaccagatggctgttcatgtgcccctctcgcaggaagcacagctcgaagctgca
ctgttaatgctgtcgtctcataatcttatccttccgcagtcaggaaagcccgtaaccgtc
ccttcgcaggacatggtactcggcatgtattatcttaccaaatcgcggccaggcgatcct
ggagaagggcgtatattctacagcgatgaagatgtgcttattgcatacaacgaagacaga
atcggccttcacgcacagatattcgttcattttaacggagcggttgatcagaaatttgat
ccgcttcgcgttcttgataccatagttgatccaaagtccgaaaaatatacatggctgaaa
tcgcagcttgaaaagaagactattctgttgactaccgttggcagggtgatttttaaccag
aacgttccggactcgattggttttattaacagagttatcgataaaaaggtagcaaaggaa
ctgatcggtcgattgagcagcgacgttggtaatgtcgaaacagcaaagttccttgataat
atcaaagaggtcgggttccattatgccatgaagggaggactttcagttggtctttccgat
gctattgtgcccgatacgaaggtgcgccatatcaagaacgcgcaaaaagacagtacgaag
gttgtcaaggagtacaacagaggaacgctgacagacaacgaacgttataatcagatcgtg
gatgtctggcagaaaacctccaatatcgttgcagaagagtcctatcagaagctgaaaaag
gacagggaaggtttcaatccgctctacatgatgcttgattccggagcccgaggctcccgc
gagcaggtaaggcagttaaccggtatgcgaggtctgatagcccgcccgcagaaatccatg
tcaggccagcctggcgaaattatcgaaaatccgattatttctaatcttaaggaagggttg
acggttcttgagtatttcatttcaacgcacggtgcccgtaaaggtctttccgatacttcg
ttgaaaaccgccgacgctggataccttaccagacgactgcatgatgtcgcgcaggatgta
attgttaccatcgaagactgcggcacgacacgcggattgcatgtgtatcggaatatcgag
gaggagacaagcggccagatcaagttccgtgaaaaaatcaggggacgcgtagctgcaaga
gacatctatgacacgctgaacaataatgtgattgtcaaggcaggagagatcattaccgaa
gaactgggtgatcttattcaggaaacagcgggtgttgaggaagcagaaatccgatcggtg
ctcacctgcgagtcaaagatcggcatctgttcaaaatgttatggcacgaacctctcggta
catcagatcgttgaaataggcgaagccgtaggtgttattgccgcacagtcgatcggcgag
cctggtacgcagttgacgcttcgtaccttccaccagggcggtacggcgcagggcggtata
tcagaaaccgagacgaaagcgttctatgaagggcagcttgagttcgaagatcttaaaacc
gttgaacacagtgccattaccgaggatggcgttgaggagattcgaatcattgttgttcag
aaaaacggcaagattaatattgttgaccctgattcaggtaaaatcctgaagcgctatgtt
gttcctcatggcgcacatctgcattgcaatgcaaaggctcttgtcaaaaaggatcaggtg
cttttcagcagcgagccaaacagtacccagattattgccgaattgcatggtcgtgtcaaa
tttgccgatatagaaaaaggcgttacctataaggaagaggttgatccgcagaccggtttt
gctcagcacaccattatcaactggcgctcgaaactcagggcgaacgagactcgggagcca
agggttctcattatcgacgagagtggcgaagtgagaaaaaactatcccgtaccgatcaag
tcaaatctctatgtcgaggatggtcagaagattgtacctggcgatatcattgccaaagta
cccagaaaccttgatcgtgcaggaggagatattacggcgggtcttccaaaagtaaccgaa
cttttcgaggctcgaattccttcggatccagctattgtgagtgaaattgatggttatgtc
agttttggttcacaacgaagaagcagtaaggagatcaaggttaaaaacgatttcggcgaa
gagaaagtatactatgtccaggtgggtaaacacgtgcttgccaacgagggtgatgaagtt
aaggctggcgatgcgatgacggatggagctgtttcgccccaggacattctccgtattcag
ggcccgaatgctgtccagcagtatcttgtgaacgaaatacagaaagtttatcagataaat
gccggtgtcgagatcaacgacaagcatcttgaggttattgttcgccagatgctgcagaaa
gtccgggttgaggaaccgggcgatacagagctgttgccgggagacctcatcgacagaagt
gcgtttgttgaagcaaacaacaatgttgccgaaaaggtcagggtgacagaaaaaggcgat
gctccttcaagaattcaggagggacagctttataaaacgcgggatattaccaaactgaac
agggagttgcgcaaaaactcgaaaaatcttgtagcttttgagccagctctccaggccaca
tcgcatccggtactgctcggcattacgagtgccgcattgcagacggaaagcgttatttct
gcggcgtcgttccaggaaaccaccaaggttcttaccgatgcggccgttgcaggaaagatt
gattatctggcgggtctcaaagagaacgttattgtgggtaaattgatccctgcgggtacc
gggttgaagcggtatcggaaccttacgttaacgggagagagtgttgaaacgatctctcat
gacgcatcagacgatgcatcaactcaaaacggtatctga
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integrated database retrieval system
