Chlorobium phaeobacteroides DSM 266: Cpha266_0536
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Entry
Cpha266_0536 CDS
T00439
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Pathway
cph03030
DNA replication
cph03410
Base excision repair
cph03420
Nucleotide excision repair
cph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cpha266_0536
03410 Base excision repair
Cpha266_0536
03420 Nucleotide excision repair
Cpha266_0536
03440 Homologous recombination
Cpha266_0536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cph03032
]
Cpha266_0536
03400 DNA repair and recombination proteins [BR:
cph03400
]
Cpha266_0536
Enzymes [BR:
cph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cpha266_0536
DNA replication proteins [BR:
cph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cpha266_0536
DNA repair and recombination proteins [BR:
cph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cpha266_0536
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cpha266_0536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DprA_N
Motif
Other DBs
NCBI-ProteinID:
ABL64593
UniProt:
A1BDW6
LinkDB
All DBs
Position
complement(589218..592058)
Genome browser
AA seq
946 aa
AA seq
DB search
MSIDNQFDFFQAGCGQPSEATKKNIPEKKPALFLIDGMAMVYRAYYALQSARMKTRDGLP
SGAVFGFTSALLKIFETYKPDYLAVAFDSREKTFRHDLYDLYKANRPSPPEDLISQLDAI
YQLVTLLGIPIIKTAGFEADDLIGSLARKFEKSCAIYIVTPDKDLAQLVNDEVYILKPGK
IQNELELLGIKEITIQFGVRPEQFTDFLALAGDASDNIPGAKGIGPKTAASLIGKYGSIA
SILLNLNEISPKNRQSLEEFQPRLKLIRQLVTIRTDLDLHVSLQNLATTTPDVEKILPFL
KQYELKSIAARLPAIFPEMNLQPESLPADNENNEKNDSPELTAPGSAKDGADYRIVTRKE
ELQALVEQLNHAAALAVDTETTSLDTFQAELVGISLSIKPKQAWFVYFGKGGVDRRVALD
MLKPVLENPSLRKTGQNLKYDLLVLKKYGIDINPVAFDTMLASYVLDPEAKHNLDDLALR
HLSIKTTTYDELVADGKKKMSILDVPPGELSDYACQDADLALRLQEVFKEKLLQEKDLLW
LCENIEFPLVPVLATMEYHGISIDTDHLKKTETTVSKQIGQLSEKIFEASGRVFNLDSPK
QLAHILFDILGLPSGKATKTGFSTNVQVLEDLAPIHPVAQDLLEYRSLQKLRNTYIEALP
KMINPLTGKLHTSFNQHVTATGRLSSSHPNLQNIPIRTLIGKEIRRAFIPSNPENLLLSA
DYSQIELRVAAEISGDEKLMEAFRNREDIHSATARTIFNTTEITPEMRRKAKEVNFGVLY
GIMPFGLSRRLNISRNEAKNIIDTYTEKYPGIFNALQQIISDGKERGYVSTLLGRRRYIP
DLNSRNKNMQKAAERAAMNTPIQGTAADIIKCAMNLCSTQLRLHKMKSVMLLQVHDELLF
ETPENEKHRLKTLVEEVMIDAAKRCGLHNVPVEVDTGIGKNWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgacaatcaatttgattttttccaggcaggttgcggccaaccgtctgaagca
acaaaaaaaaacataccggaaaaaaaacccgcactgtttctgatagatggcatggccatg
gtttaccgggcatattatgcgttgcagtctgcaagaatgaaaacccgcgatggccttcca
tcaggagctgtgtttggcttcacctctgcgctgctcaagattttcgaaacctataaaccc
gactatcttgccgttgcatttgacagcagggaaaaaacatttcgccatgacctttatgac
ctttacaaagcaaaccgtccctccccaccagaggatctcataagtcagctcgatgccatt
tatcagcttgtaacgctcctcggcataccgattatcaaaacagccgggtttgaagccgat
gaccttatcggttcacttgcgcgcaaattcgaaaagagttgcgctatctatatcgtaacg
cctgacaaagaccttgcgcaacttgtcaacgatgaagtatacatacttaaaccgggaaaa
atccagaatgaacttgaacttcttggcattaaggaaattacaatacagtttggagtccgt
cctgagcagttcaccgactttttagcactcgcaggagatgcctcggacaatatccccgga
gcaaaaggtattggcccgaaaaccgctgcaagcctgataggaaaatatggatccattgcc
agcatacttcttaatctcaatgagatatctccaaaaaaccgacagagtctcgaagaattt
caacctcgcctcaaactgatcaggcaactggtaaccatacgaaccgatctcgaccttcac
gtgagcctgcaaaaccttgcaacaacgactcctgacgtcgaaaaaatacttcctttcctg
aagcaatacgagctgaaatccatagcagcaagacttcccgctatttttccggaaatgaat
cttcagccagaatcactacccgcagataacgaaaataatgagaagaacgacagcccggag
cttactgctcccggctccgcgaaagatggcgctgattaccgaatagtcacaaggaaagag
gagctgcaggcactcgtcgaacaactgaaccatgcggcagcacttgctgttgataccgag
accaccagcctggatacctttcaggctgaacttgtcgggatatcgctctccataaaacca
aaacaggcatggttcgtctatttcggcaaaggcggagtggatagacgagtcgctctcgac
atgctcaagccggttcttgaaaacccatctctgcgaaaaacgggacaaaacctcaaatat
gacctgctcgttctgaaaaaatatggaatcgacatcaaccctgttgcatttgacaccatg
cttgcgagttacgtgctcgatccggaagcgaaacataatcttgacgaccttgcgctgcgc
catctctccataaaaaccacaacgtacgacgaactggtcgctgacggcaagaaaaaaatg
tccatccttgacgttccacccggcgaactgtccgattatgcatgtcaggatgccgatctt
gcgctgcgcctgcaggaggttttcaaagaaaaactcctgcaggaaaaagatctgctctgg
ttatgtgaaaatattgaattccctcttgtgccggttctcgcaacaatggagtatcatggc
atttcaattgataccgatcacctgaaaaaaacagaaacaactgtttcaaagcagatcggc
caactctccgaaaaaattttcgaagcatccggcagagttttcaacctcgattcgccaaaa
caacttgctcatattctgttcgacattctcgggcttccttccggcaaagcaacgaaaacc
ggcttttccaccaacgttcaggtccttgaagatcttgctccgatccaccctgtcgcacag
gatctccttgaatacagaagcctgcagaaactcagaaacacgtatatcgaagctttacca
aaaatgatcaatcctctgacgggaaaactgcatacatcattcaatcaacatgttaccgca
acaggacggctttcatcatcgcatcctaacctgcaaaacatcccgatacgcaccctgatt
ggaaaagaaatacggcgagcatttataccgtccaaccctgaaaacctgcttctttcagca
gactactcccagatagaactcagagtggctgccgaaatcagcggcgatgaaaagcttatg
gaggcgttcagaaacagggaagacatccattccgctacagcaagaaccattttcaacaca
accgagatcaccccggagatgcgacgcaaggcaaaggaggtgaatttcggagtattgtat
ggaatcatgccttttggtctttcacgacgcctcaacatctctcgcaatgaagcaaaaaat
attatcgatacgtataccgaaaagtaccccggcatattcaacgctttgcaacaaatcatc
agtgacggcaaggaacgcggttatgtttcgaccctgcttggcagaagacgatacatccct
gatctgaacagcagaaacaagaatatgcagaaagctgcagaaagagcagcaatgaatact
ccgattcagggaacggctgcagacatcatcaaatgcgcaatgaatctctgcagcacgcaa
cttcgattgcataaaatgaaatccgttatgctccttcaggttcatgacgaacttcttttt
gaaacaccggaaaacgaaaaacataggctgaaaacgcttgtagaagaggtaatgattgat
gcggcaaagcgttgcgggttacataacgtccctgtagaagtagataccggtatcggaaaa
aactggctcgaagcccattaa
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