Chlorobium phaeobacteroides DSM 266: Cpha266_0674
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Entry
Cpha266_0674 CDS
T00439
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Pathway
cph03420
Nucleotide excision repair
cph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cpha266_0674
03430 Mismatch repair
Cpha266_0674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cph03400
]
Cpha266_0674
Enzymes [BR:
cph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cpha266_0674
DNA repair and recombination proteins [BR:
cph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cpha266_0674
MMR (mismatch excision repair)
Other MMR factors
Cpha266_0674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
YgfZ_barrel
HalX
AAA_12
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABL64729
UniProt:
A1BEA2
LinkDB
All DBs
Position
769234..771438
Genome browser
AA seq
734 aa
AA seq
DB search
MTDFLLDLNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTF
TNKAAGEMRHRVDVLLQQGSAGGLWIGTFHSIFARLLRNDIHLLGYDRNFSIFDADDSKS
LIRQSMGELNISPDSVPLNTLQGIISRAKNSFILPEEFRRSAGDYNQQIAAKVYDLYTRK
LRENNALDFDDLLIKPLELFREHPMVLEALQDTFRYLLIDEYQDTNKAQYLAAKMLSAKH
RNIFVVGDDAQSIYSWRGADISNILNFQDDYTDALTFKLVENYRSTGTILQAANSVIRNN
LRQIKKELVSHRSAGDPLTLIEARNERHEAEKIGEYIHSIRIEKGYEFRSFAVFYRTNAQ
SRVLEDLMRQNRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSESLLRIINFPPRKIG
ETSIGKLREFAEAEGITLYEAITRADEGQFQSRLVNSLKGFSSLIEALRLLAETGTVYAV
LTELFSLTSIPLLLKEENTAESLARHENLQELLSMARDFSDNNPDQGSLGDFLETISLAS
NYDESQDSDNYVSLMTVHASKGLEFPVVFITGLEERLFPLNCYEPEQLEEERRLFYVAMT
RAQEKIFLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKTESGTVLADRKERQGTRNAVPE
SGGYRQRPAGAVSAPSQKPRESGLREGSTVHHAVFGQGTVLDVQGRGAGQKALIRFRNAG
EKTLMVQYANLRVL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
ttgacggattttttacttgatcttaatgatgttcagcgccaggcggtcagagccacagag
ggtcctgtcatggtgcttgccggagcaggttcaggcaagacaagggttattacctatcgc
attgcctggttgataaagaacggctatgcttcagcaaagaacattcttgcccttactttt
accaacaaggctgccggtgaaatgcgtcaccgtgtcgatgttcttttgcagcagggttca
gccggaggattgtggataggtacctttcattcgatttttgcgcgcctgttgcgcaatgat
attcatttgctcgggtatgacaggaacttttcgatatttgatgccgacgacagtaaaagt
ctgattcgccagtcgatgggtgagcttaatatttcgcctgattccgtgccgctcaatacc
ctgcagggaatcatcagcagagccaaaaacagttttattctgcccgaagagtttcgccgg
agcgcaggagactataatcagcagattgccgcaaaggtctatgatctttacaccagaaag
ctcagggagaataacgcccttgatttcgacgatctgcttatcaagccacttgaactgttc
agggaacacccgatggtgcttgaggcattgcaggatacctttcggtacctgcttatcgat
gagtaccaggataccaacaaggcgcagtatctggccgcaaaaatgctctcggcaaagcat
cgcaacatttttgttgtcggtgatgacgcccagtctatttattcctggcgaggggcggat
atatccaatattctgaactttcaggatgattacacggatgctctgaccttcaagctggtg
gagaattaccggagtaccggaacgattcttcaggcagccaacagcgtgattcgaaacaac
cttcgccagataaaaaaagagctcgtttcgcatcgaagcgcgggcgatcccctgacgctt
atcgaggctcgaaatgaacggcatgaggctgaaaagatcggggagtacatccactcgatc
cgcattgaaaaagggtacgaatttcggagtttcgcagtgttttaccgaacaaatgcccag
tcgagggtgcttgaggatctcatgcgacagaaccggattccctacaagatattcgggagc
gtctcgttttacaaacgtaaggagatcaaggatgcggttgcctatctccgctttcttctc
aatgatcgggacagtgagtcacttttgagaattattaattttccgcccagaaaaatcggt
gaaacaagtatcggaaaactacgggagtttgctgaagcagagggtataacgctgtacgag
gcaataacccgcgcagatgaagggcagttccagtctcgtcttgtaaactcgctcaagggc
ttcagttcgcttattgaagccttgcgtctgctcgccgagacgggtacggtctatgctgta
ttgacggaactgttcagtttgacctcgattcctcttctgctcaaggaggaaaataccgca
gaatctcttgcgaggcatgaaaatcttcaggaactgctctcgatggcaagggatttttcg
gataacaatcctgatcaaggttctctcggtgattttcttgaaacaatatcgctggcctcc
aactacgacgagtctcaggattccgataactatgtttcactgatgacggttcacgcatcg
aagggacttgagtttcccgttgtatttataaccggacttgaagagcggctttttcccctg
aactgttatgaacctgaacagcttgaggaggaacggcggttgttttatgttgccatgacc
agagcccaggaaaagatttttctttcatgggcacagacccgttatctctatggtcagccg
cagtactgtctgaaatcgatgtttatcagcgagattgattcttcaatcgtcaagactgaa
agcggaactgttcttgcagacagaaaagagcggcagggtacccggaacgccgttccggaa
tccggcggttatcgtcaaagacccgcgggagcagtttccgctccttctcagaagccccgg
gaaagcggacttcgagaaggctcgacggtgcatcatgcggttttcggccaggggacggtg
cttgatgtccagggtcgaggtgcaggccagaaagcgcttatcaggtttcgcaatgcaggc
gagaaaacgttgatggttcagtatgcaaatctcagagtgttatga
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