Chlorobium phaeobacteroides DSM 266: Cpha266_1371
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Entry
Cpha266_1371 CDS
T00439
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cph
Chlorobium phaeobacteroides DSM 266
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cph03400
]
Cpha266_1371
DNA repair and recombination proteins [BR:
cph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpha266_1371
Archaeal homologous recombinant proteins
Cpha266_1371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABL65400
UniProt:
A1BG73
LinkDB
All DBs
Position
complement(1566453..1567703)
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AA seq
416 aa
AA seq
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MKCLHTSDWHLGRTLYGRSRYSEFSAFLDWLSALIEKEKVDLLLVAGDVFDTTVPGSRAQ
ELYYGFLNKVARSTVCRHVVITSGNHDSPSLLDAPKALLRTLDVHVAGSVTDDPMNDEVL
VLRDKTGKAEAVVCAVPHLRDRDIRSVGPGESMQDKSLKLLEGIERHYREVCRAGEERRV
QEGGRIPMIVMGHLFTAGGQTIDNDGVREIYAGSLAHVSRSIFPPGIDYLALGHLHVPQI
VGGEEHLRYSGSPIPMGFGEASQQKMVVLVEFTEGERLITEIPIPCFQPLERISGTLQAI
TDRIFELKAAGSKAWLEIEYTGDDLSGDLRGLLDNAVKGSLLEIRRIKNNRIVALALKQL
SEDESLDELGELDVFNRCLDAAKVPQTQRPELLQAYQEILVSLHEDEKKIKSEPRE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtcttcatacttccgactggcatttaggccgaactctttatggcaggagccga
tacagcgagttttcagcttttctcgactggctttcagctctcattgaaaaggaaaaggtc
gatctgcttctcgtggccggagatgtgttcgataccacggtgccgggtagtcgggctcag
gagctctactatggatttctcaacaaggttgcccgatcgacggtttgccggcatgtggtg
atcacctccggtaaccacgattctccgtcgcttctcgatgctccgaaagctcttctgcgt
acgctcgatgtgcatgtggcaggctcggtgaccgacgatccgatgaacgacgaagtactg
gtgcttcgagacaaaaccggaaaggctgaagctgtcgtgtgcgccgtgccgcatctgcgt
gatcgcgatatccgtagtgtggggccgggcgaaagcatgcaagacaaaagtctcaagcta
ctcgaaggcattgagcgccattaccgcgaagtgtgcagggcaggggaggaacggcgggtt
caggagggagggcgtattcccatgatcgtcatgggccatctgtttacggccggaggtcaa
accattgataacgacggtgttcgcgaaatctatgcgggctcccttgcccatgtgagccgt
tcgatttttcctccgggaatagactatcttgcgctcggccatctgcatgttccgcagatt
gtaggaggcgaagagcatctgcgttacagcggatcgccaatacctatggggtttggcgag
gccagccagcagaaaatggttgtgcttgttgaatttacggagggcgaacggctgatcacc
gaaattccgataccctgttttcagccgctcgaacgcatcagcggtacgctgcaggccata
actgaccgcattttcgaattgaaggctgcaggcagcaaggcctggctggagatcgagtat
accggcgacgatctttccggagacctgagaggtctgcttgacaatgccgtgaaagggtca
ctgcttgaaatccgcagaatcaagaacaaccggattgtcgctcttgccctcaagcagcta
tcggaagacgaatcgctcgatgaactcggagaactcgacgtctttaatcgttgcctcgat
gcggcaaaggttccgcagactcagcgcccggagcttcttcaggcctatcaggagattctg
gtttcgctgcatgaagatgagaagaagatcaagagtgagccaagggagtaa
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