Chlorobium phaeobacteroides DSM 266: Cpha266_2142
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Entry
Cpha266_2142 CDS
T00439
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cph
Chlorobium phaeobacteroides DSM 266
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cph01002
]
Cpha266_2142
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cph01011
]
Cpha266_2142
Peptidases and inhibitors [BR:
cph01002
]
Cysteine peptidases
Family C82
Cpha266_2142
Peptidoglycan biosynthesis and degradation proteins [BR:
cph01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Cpha266_2142
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABL66147
UniProt:
A1BIC0
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Position
complement(2479552..2481243)
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AA seq
563 aa
AA seq
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MPFISIITYFLVCLAFSPVKQESRQQLQSDSSAQALQTKKTDLSPVAEQIRCHFEKVQGI
APSDAVRQTFNNRLALFYTAREFKPVWTKQTMAAELISAIDKAEQHGLIPADYHSTEIRY
FSENPPLTPQLQARYDLLLSDAFLTLAYHLRFGKVLPESLDPDWNVNRTLAKSALEFRLQ
QAIAAERIAGLLDELSPRHPGYERMKKGLAHYRVIVKTGGWQKVTEGKKIKEGDRDNRVR
QIRRRLQESGDLVFRSADTSRVFSKAMADAVVRFQKRNGLSVDGAAGAETIREMNISAAE
RIEQIRINMERYRWFIGDLEQRAVLVNIPGFTLQYIDNGQPRWETRVIVGKTGRETPLFK
ADMQYIVFNPQWVIPPTILAKDALPGIRKSRSYLYSRNLKVIDRNGRVVDPATVNWSQYT
AANLPYRLQQTAGDHGSLGRIKFMLPNKHIVYLHDTPHKELFQKSTRNFSSGCIRVQNPL
ELAELVLQDSVKWNSDAINAAIKTGKTSNVNLPKHIPVYLLYLTAFPQDDAIHFRGDVYN
RDNDVLKALNKSLPEFKTESCGL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgccttttattagtattattacttattttctcgtttgtctcgcgttcagtccggttaaa
caggagtctcgtcagcagttgcagtctgattcttcagctcaggctctgcagacgaaaaaa
acggatctcagtcctgttgctgagcagattcgctgtcattttgaaaaagttcagggtatc
gctccatcagatgctgttcgtcaaacctttaacaatcgccttgctcttttttatacagca
agggagtttaagccggtctggacaaaacagaccatggcggcagagcttataagcgcaatc
gataaagctgagcagcacggtttgattcctgccgattatcacagcacagagatcaggtat
ttttccgaaaatccgcctttaactccccaactgcaggcacggtatgatctgcttttgagc
gacgcgtttcttacgcttgcctaccatttacgatttggaaaggttttgcctgaaagcctt
gatcctgactggaatgtgaaccgtactcttgcaaaaagcgcgttggagttcagacttcag
caggctattgctgccgaaaggattgccggtctgctcgacgagctttctcctcgtcatccg
ggttatgaaaggatgaaaaaaggattggcgcactatcgggtcattgtgaaaacaggtggg
tggcagaaagtgaccgaggggaaaaaaattaaagagggtgatcgtgacaaccgtgtgcgg
cagattcgcaggcgtcttcaggagtccggcgaccttgttttccgctcagcagatacctcc
agagtgttcagcaaagccatggctgatgctgttgtccggttccagaaacgaaatggtctc
agtgttgacggagctgccggagcggagacgatcagggagatgaacatttcggcagcggag
cgtatcgagcagattcgtatcaatatggagcggtaccgctggtttattggtgatctcgag
cagagagctgttctggtgaatattccgggatttacgctgcaatatattgataatggtcag
cctcgctgggaaaccagagtcattgtcggcaaaacgggacgtgaaaccccgttgttcaaa
gccgatatgcagtatattgtttttaatccgcaatgggtaataccgccaaccattcttgca
aaagatgcgcttccgggtattcgtaaaagccggtcctatctctacagcagaaaccttaaa
gtcattgatcgcaacggacgggtagttgatccggcaacggtcaactggtcgcaatacacg
gcagctaacctgccataccgactgcagcagactgccggagatcacggatcgctgggacga
atcaagtttatgctgcccaacaaacacattgtctatctgcacgacaccccccacaaggag
ttgtttcagaaaagcaccagaaacttcagttcaggctgtatcagagtgcagaatcctctc
gaacttgccgaactggtgctgcaggacagcgtcaaatggaacagcgacgcgatcaatgct
gccatcaagacgggcaaaacaagcaacgttaatctcccgaaacatattccggtctatctg
ctctacctgaccgcttttccccaggatgatgcaattcacttccggggtgatgtctataac
agggataacgatgttctcaaagcgctgaacaagtctcttcctgaatttaaaacggaaagc
tgcggcttatag
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