Chlorobium phaeobacteroides DSM 266: Cpha266_2396
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Entry
Cpha266_2396 CDS
T00439
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Pathway
cph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cpha266_2396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cph03021
]
Cpha266_2396
03400 DNA repair and recombination proteins [BR:
cph03400
]
Cpha266_2396
Enzymes [BR:
cph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cpha266_2396
Transcription machinery [BR:
cph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cpha266_2396
DNA repair and recombination proteins [BR:
cph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cpha266_2396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ABL66384
UniProt:
A1BJ07
LinkDB
All DBs
Position
complement(2783943..2784926)
Genome browser
AA seq
327 aa
AA seq
DB search
MIYQMQMPAKIEVDEATHTEMFGRFIAQPLERGYGVTIGNVMRRVLLASLPGTAITGVKI
EGVYHEFSAIEGVREDVPEIVLNLKRVRFKSNCKRSCKTSLSIAGTKDFTAGDIIAKEGE
FEVLNKDLHIATVNDGSVLNIEIYIGRGRGYLPAEENHPEGMPIGFIAIDAIFTPIRNVK
FTVENTRVGQRTDYEKMILDVETDGSIAPDDSISLAGKIINDHIMYFANFSPTEEEFTEE
EFKQQDDEFESMRKLLHTKIEDLDLSVRSHNCLRLAEIDTIGDLVSRKEDELLNYKNFGK
KSLTELKEQLEKFDLKFGMDITRYQMK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatataccaaatgcagatgcctgctaaaatagaggttgacgaagctacgcatacggag
atgtttggaaggtttattgcccagcctcttgaaagagggtatggggtgacgattggtaat
gtaatgcgcagagtattgcttgcctcgctcccgggaacagcgataacgggcgtgaaaatc
gagggagtgtatcatgagttttctgcaattgagggcgtgagagaggatgttcccgaaatt
gttctgaatctcaaaagagtaaggtttaaatcaaactgtaaaagaagttgcaagacatcg
ctctctattgcaggtacgaaagactttactgctggtgacattattgccaaggaaggcgag
tttgaggttttgaataaagatctccatatcgcaacggtcaatgacggttctgttcttaat
atagagatatatatcggcagaggcagaggttatcttcctgctgaagagaatcatccggaa
ggaatgccgatagggtttatagctatcgacgctatttttactccgataagaaatgtaaag
tttacggttgaaaatacccgggtaggtcaaagaaccgattacgagaagatgattctcgat
gttgaaactgatggatcgatagcccctgatgattcgatcagtcttgcaggcaagatcatc
aatgatcatatcatgtattttgcaaacttttcgcctactgaggaagagtttactgaggag
gagttcaagcagcaggacgacgagttcgagagtatgcgcaaacttcttcatacgaaaata
gaggatctcgatctttccgtaagatcgcataactgcttgagattggcggagatcgatacg
attggcgatcttgtttcaagaaaagaggatgagctgcttaactataagaatttcggaaaa
aagtctttgacagagctcaaagagcagcttgaaaagtttgatctgaaatttgggatggat
atcaccagatatcagatgaagtga
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