Chlorobium phaeobacteroides DSM 266: Cpha266_2495
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Entry
Cpha266_2495 CDS
T00439
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cph03019
]
Cpha266_2495
03009 Ribosome biogenesis [BR:
cph03009
]
Cpha266_2495
03036 Chromosome and associated proteins [BR:
cph03036
]
Cpha266_2495
Enzymes [BR:
cph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Cpha266_2495
Messenger RNA biogenesis [BR:
cph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cpha266_2495
Ribosome biogenesis [BR:
cph03009
]
Eukaryotic type
90S particles
RNase
Cpha266_2495
Prokaryotic type
rRNA processing factors
Cpha266_2495
Chromosome and associated proteins [BR:
cph03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Cpha266_2495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ABL66483
UniProt:
A1BJA6
LinkDB
All DBs
Position
2861718..2862539
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AA seq
273 aa
AA seq
DB search
MEQFWQKLTLFAFKRSDTSGESCIKKIDQEDSVITITPETADFLETCAGSKGGNLFLYQT
ALTHRSVVHDYEHATPAVQSNQRLEFLGDAVLGLLISDYLFRNFPDSREGELSSNRAKIV
NRKSLAGFARSIGLGKHLIIGESADKNKIRSSESALADAFESLIGAIYLDKGLDAAFAFV
MKQITEHADFRSIVAAEHNYKSQLIEYTQSHHLPPPVYKVIAEEGAEHEKTFTIEVSVDD
RQMGQGTAPRKKDAEQLAAREAIDRILTDGHTP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattctggcaaaaactgaccttgtttgccttcaagcgttctgatactagcggg
gagtcctgtataaaaaaaatcgatcaggaagattcggttattaccatcactcccgaaact
gccgattttcttgaaacctgtgccggcagcaagggcggaaacctctttctctaccagaca
gccctcacccatcgttcggtagtccatgactacgaacatgcaactcctgcagttcagtca
aatcagcggcttgaatttcttggtgacgccgtcctcggtctgttgatttccgactatctt
ttcagaaattttcccgacagccgggaaggagagctttcaagcaaccgggcgaaaatagtc
aatcgaaaatctcttgcaggctttgcccggagcatcgggctcggcaaacaccttattatc
ggagaatctgccgacaagaacaagatcagatccagcgaatcagctctcgccgatgcattt
gaatcacttatcggagcgatctatctcgacaaaggccttgatgccgcatttgccttcgtc
atgaaacagattacggaacatgcggatttcagaagcatcgttgccgcagaacataattat
aaaagtcagttgatcgaatacacacagtcacaccatcttccgccaccagtctataaggtt
atcgctgaagaaggtgctgaacatgaaaaaacatttaccatagaggtctctgtggacgac
cggcagatgggacagggaacggcccccagaaaaaaagatgccgaacaacttgctgcaaga
gaggccattgatcgaatcttgacagacggtcacaccccctga
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