Clavibacter phaseoli: FGI33_00030
Help
Entry
FGI33_00030 CDS
T08435
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
cpha
Clavibacter phaseoli
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpha03021
]
FGI33_00030
Transcription machinery [BR:
cpha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FGI33_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
KORA
MarR_2
HTH_23
HTH_Crp_2
MarR
HTH_3
DUF7343
UPF0122
HTH_38
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
UKF35571
LinkDB
All DBs
Position
complement(4891..5880)
Genome browser
AA seq
329 aa
AA seq
DB search
MTGTLRTRALAAAPPASRGSSPRGSAATLPRATPLPRPTPLAPDLTAARDEKRRLTHDRF
VRAAAVAEDAAGDAERRRLHDQIVLDHLELADQLARQHSGRAHDWSDLRQVGYLGLVKAA
RRYDPGFGAPFVSFAIPTISGEIKRHLRDNGWVIRPPRQVQELRHALLAVVPALTQRLGR
TPTDAELAAHTGHPREEIVEALAAHSSLRPASLDFTVHEDEGTSLADTIGTDDPGYARAE
RTVLLDAARGVLSDRDRRILHLRFVDECSQSEIAAELGVTQMQVSRLLARILGQLRAELT
RGEGEALPEVAPLAAVSPIRPRGVDRRTA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaacgctgcgcacgcgcgccctcgccgccgccccgcccgcctcgcgcggatcc
tccccccgcggatccgccgcgacgctcccgcgggcgaccccgctgccccgccccaccccg
ctcgcgcccgacctcacggcagcgcgggacgagaagcgccggctgacccacgaccggttc
gtgcgcgccgccgccgtggctgaggacgcggcgggcgacgccgagcgccgccgcctgcac
gaccagatcgtgctcgaccacctcgaactcgccgaccagctcgcacgccagcactcgggc
cgcgcgcacgactggagcgacctgcgccaggtcggctacctcggcctcgtgaaggccgcg
cgccggtacgacccgggcttcggcgcgcccttcgtgtcgttcgcgatccccaccatctcc
ggcgagatcaagcgccacctgcgcgacaacgggtgggtgatccgtccgccgcggcaggtc
caggagctgcggcacgcgctgctcgcggtggtgcccgcgctcacgcagcgcctcggccgc
accccgaccgacgccgagctggccgcgcacaccgggcacccgcgcgaggagatcgtggag
gcgctcgcggcgcactccagcctccggcccgcgtcgctcgacttcactgtgcacgaggac
gagggcacgtccctcgccgacacgatcggcaccgacgaccccggctacgcgcgcgccgag
cgcacggtgctgctggacgcggcgcgcggcgtgctcagcgatcgcgaccggcggatcctg
cacctgcgcttcgtcgacgagtgcagccagagcgagatcgcggccgagctcggcgtgacg
cagatgcaggtgtcgcggctgctcgcgcggatcctcgggcagctgcgcgccgagctcacc
cgcggcgagggcgaggccctgccggaggtggcgccgctggccgccgtgtcgccgatccgc
ccgcgcggggtcgaccgccgcacggcctga
DBGET
integrated database retrieval system
