Clavibacter phaseoli: FGI33_00045 Help Entry FGI33_00045       CDS       T08435                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism cpha  Clavibacter phaseoli Brite KEGG Orthology (KO) [BR:cpha00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cpha03400]     FGI33_00045 Enzymes [BR:cpha01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      FGI33_00045     5.6.2.6  RNA 3'-5' helicase      FGI33_00045 DNA repair and recombination proteins [BR:cpha03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     FGI33_00045 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH3_Lhr WH2_Lhr WH4_Lhr DEAD Helicase_C ResIII AlkZ-like DUF6406 AAA_25 Cas3-like_C_2 AAA_22 Motif Other DBs NCBI-ProteinID:  UKF35574 LinkDB All DBs Position complement(8612..13426) Genome browser AA seq 1604 aa AA seqDB search MDPVLARFSPATREWFQGAFPGPTAAQTGAWEAVQKGSHALVVAPTGSGKTLAAFLWSID RLASRPAPEDPMRRTRVLYISPLKALAVDVERNLRSPLVGIVQTAKRLGAEPPEVTVGVR SGDTPAADRRALAKTPPDILITTPESLFLMLTSAARETLAGVETVIVDEVHAVAATKRGS HLALSLERLDALLEKPAQRIGLSATVRPPEEVARFLGGRSPVTIVSPKNTKEFDLRVIVP VDDMTELGTTAPLEGSAAQGDAPQQGSIWPHVEEGIVDLVLQHTSSIVFTNSRRLAERLT ARLNEIYTGRIEEGRIDAEGRAVAGGSATADADADAVPVLAGAAAGSGSSRPVDATTSSA TRRTAARPPAEVMAQAGSTEGADPVLAKAHHGSVSKEQRALIEDDLKSGRLRCVVATSSL ELGIDMGDVDLVVQVEAPPSVASGLQRVGRAGHQVGEVSRGVIFPKHRADLIHSAVAAER MASGQIESLRVPANPLDVLAQQTVAAVALEPLGVEEWFDVVRRSAPFATLPRSAYEATLD LLSGRYPSDEFAELRPRIVWDRDEGTIEGRPGAQRLAVTSGGTIPDRGLFGVFMVGEKAS RVGELDEEMVYESRVGDVFALGATSWRIQEITHDRVLVTPAFGEPGKLPFWKGDGLGRPL ELGRAIGAFVRELSGSAADDARARAGRVGLDDRAVNNLLAFLDDQKKATGHVPNDRTLVV ERFRDELGDWRVVLHSPYGMQVHAPWALAVGARVTELYGIDGATMANDDGIVVRIPETDG EPPGADLFVFEPDELDAIVTREVGGSALFASRFRECAARALLLPRYNPGRRSPLWQQRQR ASQLLDVARKFPAFPIVLETVREVLQDVYDLPALTSLAKDIEARRIKIVETTTEDASPFA RSLLFSYVGAFMYEGDSPLAERRAAALSLDAGLLSELLGRAELRELLDPAVIARTELELQ RLAPDRRAKGLEGVADLLRILGPLDAEEVAARLEPEEAGSAADHLDALVAGKRALRVSFG GQPRVAAIEDASRLRDALGVPLPIGTPLAFVEPVADPLGDLVGRYARTHGPFTIADAATG IGLGSAVIADTLARLGAQRRVVEGEFRPGASGSEWCDVEVLRRLRSRSLAALRSEVEPVE RAAYARFLPAWQHVAGADRERGLRGVDGVLQVIEQLAGAPVPASAWETLVLPARVRDYSP AFLDELTSTGEVIWSGAGTLAGADGWVSLHLADQVALTLPEPDAHDTDELQREILTTLGT GGGYFFRQLSDAVGSTDDKALVTALWDLVWAGLVTNDTLSPLRALLAGGSTAHKTPQRAP RGRMYRGGRMPRPDMPTRTGPSTAAGRWSIVPLAETDATVRAAGTAELLLERYGVVTRGS VMTERVPGGFALTYKVLAGFEDTGRARRGYFIETLGAAQFSTGGTVDRLRGFTRDPDAGE RPLNALTLAATDPANAYGAALPWPRLDGSSGASDGDGSDGAGSGSGDPAGDASAAVSESG SVDARGERPTGHRAGRKAGALVVLVDGELVLYVERGGKTVLLFDDDEVVIRAAAESLGGI VRRGGVAKLAIEKVNGAFILGTPLGTALQEHGFSATPRGLRMRS NT seq 4815 nt NT seq  +upstreamnt  +downstreamnt atggatcccgtcctcgcgcgcttctccccggccacccgggagtggttccagggcgcgttc cccggccccaccgcggcgcagaccggcgcatgggaagccgtgcagaaggggtcgcacgcg ctcgtcgtggcgccgaccggatccggcaagacgctcgcggcgttcctgtggtcgatcgac cggctcgcctcgcggcccgcgccggaggatcccatgcgccgcacgcgcgtcctctacatc tcgccgctgaaggcgctcgcggtcgacgtggagcgcaacctccgctcgccgctcgtgggc atcgtgcagacggccaagcggctgggcgccgagccgcccgaggtcacggtcggcgtgcgc tccggcgacaccccggcggccgaccggcgcgcgctcgcgaagacgccgcccgacatcctc atcaccacgcccgagtcgctgttcctcatgctcacctcggccgcgcgcgagacgctggcg ggcgtcgagacggtcatcgtcgacgaggtgcacgcggtcgcggccaccaagcgcggcagc cacctcgcgctctcgctcgagcggctcgacgcgctgctggagaagccggcccagcggatc ggcctgtcggccaccgtgcggccgcccgaggaggtggcgcggttcctgggcgggcgctcg cccgtcaccatcgtctcgccgaagaacacgaaggagttcgacctgcgggtcatcgtgccg gtcgacgacatgaccgagctcggcaccacggcgccgctcgaggggtcggcggcgcagggg gacgcgccgcagcagggatccatctggccgcacgtggaggagggcatcgtcgacctcgtg ctgcagcacacgtcgtccatcgtcttcacgaacagcagacggctggcggagcggctcacg gcccggctcaacgagatctacacggggcgcatcgaggaggggcgcatcgacgccgagggg cgggccgtcgcgggcggatccgcgaccgcggacgcggacgccgacgccgtgcccgtgctc gcgggcgccgcggccggatccgggtcgtcgcggcccgtcgacgcgaccacgtcctccgcc acgcgccgtacggccgcccgaccgcccgccgaggtcatggcgcaggccgggagcaccgag ggcgcggatcccgtgctcgccaaggcgcaccacggatccgtctcgaaggagcagcgcgcc ctcatcgaggacgacctgaagtccgggcgcctgcgctgcgtggtcgccacctccagcctc gagctcggcatcgacatgggcgacgtcgacctcgtcgtgcaggtcgaggcgccgccctcg gtcgcgagcggcctgcagcgcgtcggccgggccggccaccaggtgggcgaggtctcgcgc ggcgtcatcttccccaagcaccgggccgacctcatccactccgccgtcgccgccgagcgc atggcgagcgggcagatcgagtcgctgcgcgtgccggcgaacccgctcgacgtgctcgcg cagcagaccgtggcggccgtcgcgctcgagccactcggcgtcgaggagtggttcgacgtc gtgcgccgcagcgcgcccttcgcgacgctgccgcgctccgcgtacgaggccacgctcgac ctcctgagcggccgctacccgtccgacgagttcgcggagctgcggccgcgcatcgtgtgg gaccgcgacgagggcaccatcgagggtcggccgggcgcgcagcggctcgcggtcacctcc ggcggcaccatccccgaccgcggcctgttcggcgtgttcatggtgggcgagaaggcgtcg cgcgtgggcgagctcgacgaggagatggtctacgagtcccgcgtgggcgacgtgttcgcg ctgggggccacgagctggcggatccaggagatcacgcacgaccgtgtgctggtgacgccc gcgttcggcgagcccgggaagctgccgttctggaagggcgacgggctcgggcggccgctc gagctggggcgcgccatcggggcgttcgtgcgcgagctgtccggatccgcggcggacgac gcccgggccagggccggccgcgtgggcctcgacgaccgggccgtcaacaacctgctcgcg ttcctcgacgaccagaagaaggccaccggccacgtgccgaacgaccgcaccctcgtggtc gagcgcttccgcgacgagctgggcgactggcgcgtggtgctgcactcgccctacgggatg caggtgcacgcgccatgggcgctcgcggtgggcgcccgggtcaccgagctgtacggcatc gacggcgcgaccatggccaacgacgacggcatcgtcgtccgcatccccgagaccgacggc gagccgccgggggccgacctcttcgtgttcgagccggacgagctcgacgccatcgtcacg cgcgaggtgggcgggtccgcgctcttcgcgtcgcgcttccgggagtgcgccgcccgcgcg ctcctgctgccgcgctacaaccccggccgccgctcgcccctgtggcagcagcgccagcgc gcgtcgcagctgctcgacgtcgcgcggaagttccccgcgttcccgatcgtgctcgagacc gtgcgggaggtgctgcaggacgtctacgacctgcccgcgctcacgtcgctcgcgaaggac atcgaggcgcggcggatcaagatcgtggagaccaccacggaggacgcgtcgccgttcgcg cggagcctcctcttcagctacgtcggcgcgttcatgtacgagggcgacagcccgctcgcc gagcgccgggccgccgcgctctcgctcgacgcggggctgctgtccgagctgctggggcgg gcggagctgcgcgagctgctggatcccgcggtcatcgcgcgcaccgagctcgagctgcag cgcctcgcgcccgaccgccgcgccaaggggctcgagggcgtggccgacctgctgcggatc ctcggcccgctcgacgccgaggaggtcgccgcgcgcctcgagcccgaggaggccggatcc gccgccgaccacctcgacgcgctcgtggccggcaagcgcgccctccgcgtctcgttcggc gggcagccgcgcgtcgccgccatcgaggacgcgagccgcctgcgcgacgccctcggggtg ccgctgcccatcggcacgccgctcgcgttcgtcgagcccgtggccgatcccctgggcgac ctcgtcggccggtacgcgcgcacgcacggccccttcaccatcgcggacgcggccaccggc atcggcctcggatccgccgtcatcgccgacacgctcgcccggctcggggcccagcggcgc gtggtcgagggcgagttccggccgggcgcctccggcagcgagtggtgcgacgtcgaggtg ctgcggcgtctccgcagccgctcgctcgccgcgctccgcagcgaggtcgagcccgtcgag cgggccgcgtacgcgcggttcctgccggcgtggcagcacgtcgcgggcgcggatcgcgag cgcgggctccgcggggtcgacggcgtgctgcaggtcatcgagcagctcgcgggcgcgccc gtgcccgcctccgcgtgggagacgctcgtgctgccagcgcgcgtgcgcgactacagcccc gcgttcctcgacgagctcacgtcgacgggcgaggtcatctggtcgggcgccggcacgctc gcgggcgccgacggctgggtcagcctgcacctcgccgaccaggtcgccctcacgctgccc gagcccgacgcgcacgacaccgacgagctgcagcgcgagatcctcaccacgctcggcacg ggcggcggctacttcttccggcagctgagcgacgccgtcgggtccacggacgacaaggcg ctcgtcacggcgctctgggacctcgtgtgggcgggcctcgtcacgaacgacacgctctcg ccgctgcgggcgctgctcgcgggcggatccaccgcgcacaagacgccgcagcgggcgccg cgcgggcggatgtaccggggcgggcgcatgccgcggcccgacatgcccacgcgcaccggc ccgtcgacggcggccggacgctggtccatcgtgccgctcgccgagaccgacgccaccgtg cgcgccgcgggcacggccgagctgctgctcgagcggtacggcgtggtcacgcgcggatcc gtcatgaccgagcgcgtgcccggcggcttcgcgctcacgtacaaggtgctcgcgggcttc gaggacacggggcgcgcgcgtcgcggctacttcatcgagacgctgggcgccgcgcagttc tccacgggcggcacggtcgaccggctgcgcggcttcacgcgggatccggacgcgggcgag cggccgctgaacgcgctgacgctcgcggccacggatccggccaacgcgtacggggcggcg ctcccgtggccgcggctggacgggtcgagcggcgcgtccgacggcgacgggagcgacgga gcggggtccggctccggggatccggccggcgacgcgtcggccgcggtctcggagtccggc agcgtcgacgcgcgcggcgagcgccccaccgggcaccgcgccggccgcaaggcgggcgcg ctcgtggtgctggtcgacggcgagctcgtgctctacgtggagcgcggcggcaagaccgtg ctcctcttcgacgacgacgaggtcgtgatccgcgcggcggccgagtcgctcggcgggatc gtccgccgcggcggggtcgcgaagctcgcgatcgagaaggtcaacggggcgttcatcctc ggcacgccgctcggcaccgcgctccaggagcacggcttctcggcgacgccgcgcgggctg cggatgcggtcgtga

DBGET integrated database retrieval system