Clavibacter phaseoli: FGI33_00185
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Entry
FGI33_00185 CDS
T08435
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpha
Clavibacter phaseoli
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpha03032
]
FGI33_00185
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_00185
Enzymes [BR:
cpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FGI33_00185
DNA replication proteins [BR:
cpha03032
]
Prokaryotic type
DNA Topoisomerases
FGI33_00185
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FGI33_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4982
Motif
Other DBs
NCBI-ProteinID:
UKF35601
LinkDB
All DBs
Position
42127..43095
Genome browser
AA seq
322 aa
AA seq
DB search
MVRLRRSDATGKGYTRKRAGKGWTYLDSDGNRVADKALRARMDHLGIPPAWTDVWIAPYE
NGHVQATGMDSAGRRQYIYHPTWREQKDRIKFDRSLQLAESLPAARRQVTIHLRQDGFTR
DRALAAGFRMLDTGSLRVGSERYTESNGSHGLSTLLCSHVTVHDDTVHLEFPAKSGQEWS
SDIRDHDLVQVVGGLQERGPNARLLAYEDGGEWHPLGAADINDYVRERTGGEFTAKDFRT
LHGTVAAAISLAKHGPEATKGKRQRALAQAYRDAAEVLSNTPTIAKNSYVDPRLVDEYVH
GRTIDPQRLASGETELRNLLFR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtcagactccggcgcagcgacgccaccggcaagggctacacgcgcaagagggccggg
aagggctggacctacctcgactccgacgggaaccgggtcgccgacaaggcgctgcgcgcc
cgcatggaccacctcgggatcccgccggcgtggaccgacgtctggatcgcgccgtacgag
aacggccacgtgcaggcgaccggcatggacagcgccgggcggcggcagtacatctaccac
ccgacctggcgcgagcaaaaggaccggatcaagttcgaccggtcgctgcagctcgccgag
tcgctcccggccgcgcgccggcaggtcaccatccacctccgccaggacggcttcacgcgc
gaccgcgcgctggccgccggcttccggatgctcgacacgggcagcctccgcgtgggcagc
gagcgctacaccgagtcgaacggcagccacgggctgtcgacgctgctctgctcgcacgtc
accgtgcacgacgacaccgtgcacctcgagttccccgcgaagagcggccaggagtggtcg
agcgacatccgcgaccacgatctcgtgcaggtcgtcgggggcctccaggagcgcggtccg
aacgcccggctgctggcctacgaggacggcggcgagtggcacccgctcggcgcggccgac
atcaacgactacgtccgggagcggaccggcggcgagttcaccgcgaaggacttccgcacg
ctgcacggcaccgtcgccgcggcgatcagcctggcgaagcacgggcccgaggcgaccaag
ggcaagcggcagcgtgccctcgcgcaggcgtaccgcgacgccgccgaggtgctcagcaac
accccgaccatcgcgaagaacagctacgtggatccgcggctcgtcgacgagtacgtgcac
ggccgcacgatcgacccgcagcgcctcgcgtcgggggagacggagctgcggaacctgctg
ttccgatga
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integrated database retrieval system
