Clavibacter phaseoli: FGI33_00910
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Entry
FGI33_00910 CDS
T08435
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGI33_00910 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpha03019
]
FGI33_00910 (groL)
03110 Chaperones and folding catalysts [BR:
cpha03110
]
FGI33_00910 (groL)
03029 Mitochondrial biogenesis [BR:
cpha03029
]
FGI33_00910 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpha04147
]
FGI33_00910 (groL)
Enzymes [BR:
cpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FGI33_00910 (groL)
Messenger RNA biogenesis [BR:
cpha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FGI33_00910 (groL)
Chaperones and folding catalysts [BR:
cpha03110
]
Heat shock proteins
HSP60 / Chaperonin
FGI33_00910 (groL)
Mitochondrial biogenesis [BR:
cpha03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FGI33_00910 (groL)
Exosome [BR:
cpha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FGI33_00910 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FGI33_00910 (groL)
Exosomal proteins of breast cancer cells
FGI33_00910 (groL)
Exosomal proteins of colorectal cancer cells
FGI33_00910 (groL)
Exosomal proteins of bladder cancer cells
FGI33_00910 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
bHLH_NPAS4
Motif
Other DBs
NCBI-ProteinID:
UKF35732
LinkDB
All DBs
Position
190770..192389
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAVTEELKAAAKEIETKEEIAATASISAGDSTIGAIIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSQYFVTDPERQEAVFEDAYILIVNSKISNIKDLLPIVDKVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIA
EEVGLKLENVTLDLLGTARKVVITKDETTIVEGGGDATEIAARVQQIRNEIGNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFEKLQLEGDEATGANIVRVAVDAPLKQIALNAGLEPGVVAERVRNLPSGHGLNAAT
GEYVDMLAAGINDPVKVTRSALLNAASIAGLFLTTEAVVADKPEKNPAPAGDPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatcatcgcttttgacgaagaagcccgccgcggcctcgagcgcggcctgaac
atcctggccgacgcggtccgcgtgaccctcggcccgcgtggccgcaacgtcgtcctcgag
aagaagtggggcgcccccaccatcacgaacgacggcgtgtccatcgccaaggagatcgag
ctcgacgacccgttcgagaagatcggcgcggagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgaccaccgcgacagtcctcgcgcaggccctggtccgc
gagggcctccgcaacgtcgccgcgggcgccgaccccatcagcctcaagcgcggcatcgag
aaggccgtcgcggccgtcacggaggagctcaaggccgccgcgaaggagatcgagaccaag
gaggagatcgccgccaccgcgtccatctccgccggcgactccaccatcggcgcgatcatc
gccgaggcgatcgacaaggtcggcaaggagggcgtcgtcaccgtcgaggagtccaacacc
ttcggcaccgagctcgagctcaccgagggcatgcgcttcgacaagggctacctgtcgcag
tacttcgtcaccgaccccgagcgccaggaggccgtgttcgaggacgcgtacatcctgatc
gtcaactcgaagatctcgaacatcaaggacctgctgccgatcgtcgacaaggtcatccag
tcgggcaagcagctcctcatcatcgcggaggacgtcgacggcgaggccctggccacgctc
gtcgtgaacaagatccgcggcatcttcaagtcggtcgccgtcaaggcccccggcttcggc
gaccgccgcaaggcgcagctgcaggacatcgccatcctcaccggtggccaggtcatcgcc
gaggaggtcggcctcaagctcgagaacgtcaccctcgacctgctcggcacggcccgcaag
gtcgtcatcacgaaggacgagaccacgatcgtcgagggcggcggagacgccaccgagatc
gcggcccgcgtgcagcagatccgcaacgagatcggcaacacggacagcgactacgaccgc
gagaagctccaggagcgcctcgcgaagctggctggcggcgtggccgtcatcaaggccggc
gccgcgaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgctggtggtggcgtcgccctcatccaggcc
ggcaagctcgccttcgagaagctccagctcgagggcgacgaggcgacgggcgcgaacatc
gtccgcgtcgcggtcgacgctccgctcaagcagatcgccctcaacgcgggcctcgagccc
ggcgtcgtggccgagcgcgtccgcaacctgccctcgggtcacggcctcaacgccgccacg
ggcgagtacgtcgacatgctcgccgcggggatcaacgacccggtgaaggtcacgcgctcg
gctctgctgaacgccgcgtccatcgccggcctgttcctcacgaccgaggcggtcgtcgcc
gacaagcccgagaagaacccggccccggccggcgaccccacgggtggcatggacttctag
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