Clavibacter phaseoli: FGI33_01180
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Entry
FGI33_01180 CDS
T08435
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha00061
Fatty acid biosynthesis
cpha00071
Fatty acid degradation
cpha01100
Metabolic pathways
cpha01212
Fatty acid metabolism
cpha02024
Quorum sensing
cpha04146
Peroxisome
Module
cpha_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FGI33_01180
00071 Fatty acid degradation
FGI33_01180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FGI33_01180
09145 Cellular community - prokaryotes
02024 Quorum sensing
FGI33_01180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cpha01004
]
FGI33_01180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpha04147
]
FGI33_01180
Enzymes [BR:
cpha01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FGI33_01180
Lipid biosynthesis proteins [BR:
cpha01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FGI33_01180
Exosome [BR:
cpha04147
]
Exosomal proteins
Exosomal proteins of breast milk
FGI33_01180
Exosomal proteins of breast cancer cells
FGI33_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UKF35781
LinkDB
All DBs
Position
253758..255344
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AA seq
528 aa
AA seq
DB search
MTSDTPLQPEHEQPHGGFASVSVAAILAESAERHADRVAVVVGDVSTTYRELWDETRAYA
GALAERGVGEGTRVAMLIPNVADFPRVYYAVLALGGVVVPVHALLKADEIAYVLRDSGSA
LLVCAGPLLEQGAKGAALADVPVISVLVPAATEGGPDRLEELAQAATPIRTYVPRRPSDT
ATILYTSGTTGQPKGAEGCHLALVMQVDVLLLDTFDLRAGDRILGCLPLFHTFGQTCTMN
ASFRAGATIVMVPRFDGDTALALMVEHDTQVFMGVPTMYYALLAAAGRNPARPHLRYAIS
GGAAIPVAVIDAFREQFDAEIHEGYGLTETSPVASFNHVGVEARPGTVGRPIWGVQVEIA
DPEHEDRVELVERGTLGEIVIRGHNLMNGYLHRPEDTARAVVDGWFRTGDLGTIDDDGYI
RVVDRTKDMILRNGYNVYPREVEEVLARHDAVAQCAVFGVPHEEHGQEIVAAIVAKADAT
VDAAEVVAYMRERIASYKYPRRVEVVEALPLGPSGKVLKRTLVERFGA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgacacgcccctccagcccgagcacgagcagccccacggcgggttcgcctcc
gtctcggtcgccgcgatcctcgccgagtccgccgagcggcacgccgaccgcgtcgccgtg
gtggtgggggacgtctccaccacctaccgcgagctctgggacgagacgcgcgcctacgcc
ggcgccctcgccgagcgcggcgtgggggagggcacgcgcgtcgcgatgctcatcccgaac
gtcgccgacttcccgcgcgtctactacgcggtgctcgcgctcggcggcgtcgtcgtgccc
gtgcacgcgctgctcaaggccgacgagatcgcgtacgtgctgcgcgactcgggatccgcg
ctcctcgtctgcgccggaccgctgctcgagcagggcgcgaagggcgccgcgctcgccgac
gtgcccgtgatcagcgtgctcgtgcccgccgccaccgagggcggacccgaccggctggag
gagctcgcgcaggccgcgacgcccatccgcacctacgtgccgcgccggccgtccgacacc
gcgacgatcctctacacgtccggcaccacgggccagccgaagggcgccgagggctgccac
ctcgcgctcgtgatgcaggtcgacgtgctgctgctcgacaccttcgacctgcgcgcgggc
gatcggatcctcggctgcctgcccctgttccacaccttcgggcagacgtgcaccatgaac
gcgtcgttccgcgcgggcgcgaccatcgtgatggtgccgcgcttcgacggcgacaccgcg
ctcgcgctcatggtcgagcacgacacgcaggtgttcatgggcgtgccgaccatgtactac
gccctgctcgcggcggccgggcggaaccccgcgcgcccgcacctccggtacgccatctcg
ggcggcgccgcgatccccgtcgccgtcatcgacgcgttccgggagcagttcgacgcggag
atccacgagggctacggcctgaccgagacctcgcccgtcgcgtcgttcaaccacgtgggc
gtcgaggcccggccgggcaccgtcgggagaccgatctggggcgttcaggtggagatcgcc
gaccccgagcacgaggaccgcgtggagctcgtcgagcgcggcacgctcggcgagatcgtg
atccgcggccacaacctcatgaacggctacctgcaccgccccgaggacaccgcgcgcgcg
gtcgtcgacggctggttccggacgggcgacctcggcacgatcgacgacgacggctacatc
cgcgtggtcgaccggacgaaggacatgatcctgcgcaacggctacaacgtgtacccgcgc
gaggtcgaggaggtgctcgcccggcacgacgccgtcgcgcagtgcgcggtgttcggcgtg
ccgcacgaggagcacgggcaggagatcgtcgccgcgatcgtggcgaaggcggacgcgacg
gtcgacgccgcggaggtcgtcgcctacatgagggagcgcatcgcgtcctacaagtacccg
cgccgcgtcgaggtggtcgaggcgctgccgctcgggccgagcggcaaggtcctcaagcgg
acgctcgtcgagcggttcggcgcgtga
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