Clavibacter phaseoli: FGI33_02025
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Entry
FGI33_02025 CDS
T08435
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03030
DNA replication
cpha03430
Mismatch repair
cpha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGI33_02025
03430 Mismatch repair
FGI33_02025
03440 Homologous recombination
FGI33_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpha03032
]
FGI33_02025
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_02025
Enzymes [BR:
cpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGI33_02025
DNA replication proteins [BR:
cpha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGI33_02025
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGI33_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF1265
Motif
Other DBs
NCBI-ProteinID:
UKF35932
LinkDB
All DBs
Position
complement(423074..423703)
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AA seq
209 aa
AA seq
DB search
MPLDFTAIDFETANNSSASACSVGLVKVRDGVVVETASWLIRPPAGHDTFSVWNTRIHGI
VEDDVIDADGWADQLPRLMAFAGDDHLVAHNARFDMGVIQGACKATALIPPPYSYLCSLQ
VARRTYALDSYRLPVAARAAGFEDFSHHEALADARACAAIVVHAASRHGAASIAGLAEAA
GVGLGRIGAPRTQTVTQASAAATPPIDWA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggacttcaccgcgatcgacttcgagaccgccaacaactcgtcggcgagcgcg
tgctcggtgggtctcgtgaaggtccgggacggcgtcgtggtcgagaccgcgtcctggctc
atccggccgcccgcggggcacgacaccttctcggtctggaacacgcggatccacggcatc
gtcgaagacgacgtcatcgacgccgacggctgggccgaccagctgccgcgcctgatggcc
ttcgcgggcgacgaccacctcgtggcccacaacgcgcgcttcgacatgggcgtgatccag
ggcgcgtgcaaggccaccgcgctcatcccgccgccgtactcctacctctgcagcctccag
gtcgcgcgccgcacctacgcgctcgactcgtaccggctgccggtcgccgcgcgggccgcg
ggcttcgaggacttctcgcaccacgaggcgctggcggacgcccgcgcgtgcgccgccatc
gtcgtgcacgcggcctcccggcacggcgccgcgtcgatcgcggggctggcggaggcggcc
ggcgtcggcctcggccgcatcggcgcgccgcgtacgcagaccgtcacgcaggcctccgcg
gccgcgacgccgcccatcgactgggcctga
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