Clavibacter phaseoli: FGI33_02385
Help
Entry
FGI33_02385 CDS
T08435
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpha
Clavibacter phaseoli
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpha03016
]
FGI33_02385 (truB)
Enzymes [BR:
cpha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FGI33_02385 (truB)
Transfer RNA biogenesis [BR:
cpha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FGI33_02385 (truB)
Prokaryotic type
FGI33_02385 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UKF35997
LinkDB
All DBs
Position
515686..516645
Genome browser
AA seq
319 aa
AA seq
DB search
METPTPRAAPSTASGLLLIDKRGEWTSHDLVARTRRLAGTRKVGHAGTLDPMATGLMILG
VNSSTRLLTYLVGLDKEYLATIRLGRATTTDDREGEVVSRAEPGRIRDLAVADVERAIAG
LRGTISQVPSAVSAIKVDGKRAYARVRAGEEVELAAREVTVSAFDVLRFDAVEAEEGEED
GAQLDLDVRITCSSGTYVRALARDLGRELGVGGHLTALRRTRVGPFHVDDAVAIDDLVVA
DRLIPPADAAARLFDVLHLTDQEAVDLGHGKKLTTPDEAPTEDPLAAVAPDGRLVGLVGF
RGRTGTSIVNFPADEAGAS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgaccccccgcgccgcgccctccaccgcgagcggcctgctcctcatcgac
aagcgcggggagtggacgagccacgacctcgtcgcccgcacgcgccgcctcgccggcacc
cgcaaggtcgggcacgcgggcacgctcgacccgatggcgaccggcctcatgatcctcggc
gtcaacagctccacgcgcctgctcacgtacctcgtcggcctcgacaaggagtacctcgcg
acgatccgcctcggccgcgccacgaccacggacgaccgcgagggcgaggtcgtctcgcgc
gccgagcccgggcggatccgcgacctcgccgtcgccgacgtggagcgcgccatcgccggc
ctccgcggcaccatctcgcaggtgccgagcgccgtgagcgccatcaaggtcgacggcaag
cgcgcgtacgcccgcgtccgcgccggcgaggaggtcgagctcgccgcgcgcgaggtcacc
gtctcggcgttcgacgtgctgcgcttcgacgcggtcgaggcggaggagggcgaggaggac
ggcgcgcagctcgacctcgacgtccgcatcacgtgctcctccggcacctacgtgcgggcg
ctcgcgcgggacctcggccgcgagctcggcgtcggcggccacctcaccgcgctccgccgc
acgcgcgtcggcccgttccacgtcgacgacgccgtcgccatcgacgacctggtggtcgcc
gaccgcctcatcccgccggcggacgcggccgcgcgcctcttcgacgtgctgcacctcacc
gaccaggaggccgtcgacctcgggcacggcaagaagctcacgacgcccgacgaggcgccc
accgaggatccgctcgccgcggtcgcgcccgacggccggctcgtggggctggtcggcttc
cgcggccgcacgggcacgtccatcgtcaacttcccggccgacgaggcgggcgcctcgtga
DBGET
integrated database retrieval system
