Clavibacter phaseoli: FGI33_02900
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Entry
FGI33_02900 CDS
T08435
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGI33_02900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpha03019
]
FGI33_02900
03016 Transfer RNA biogenesis [BR:
cpha03016
]
FGI33_02900
Enzymes [BR:
cpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FGI33_02900
Messenger RNA biogenesis [BR:
cpha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FGI33_02900
Transfer RNA biogenesis [BR:
cpha03016
]
Prokaryotic type
tRNA degradation factors
FGI33_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
UKF36097
LinkDB
All DBs
Position
627661..629934
Genome browser
AA seq
757 aa
AA seq
DB search
MEGPEIKFAEAVLDNGKYGTRTVRFEAGRLAQQAQGAVAAYLDEDTMLLSATSVGKHPKD
NFDFFPLTIDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFITGLRNEVQ
VVITVLSIAPDEFYDSLAINAASASSMLSGIPFSGPIAGVRLALIGDQWVVFPKHSQLKE
AVFDITVAGRVVTDSEGNEDVAIMMVEAEATEGAWDLIQGGATKPDEAIVAQGLEAAKPF
IQQLVAAQASLAQQAAKPTVDYPVFLPYAQETYDAVSALALDELGTVYQTADKIERQDAD
DALKTRTKEAVAAKVEAGELPASALTEFSAAYKSVTKTVVRGRILRDGIRMDGRGLADIR
PLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTKKRYLHHYNFPPY
STGETGRVGSPKRREIGHGFLAERALVPVLPSREDFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLRAPVAGIAMGLVSDTVDGQVRYAALTDILGAEDALGDMDFKVAGTSEF
VTAIQLDTKLDGIPTSVLDGALKQAKEARTAILGVLNQAIDAPDEMAPTAPRVISVNIPV
DKIGELIGPKGKTINAIQDETGADISIEEDGTVYIGAVDGPSAEAARAQVNAIANPTNPE
VGESFLGTVVKIATFGAFVSLLPGKDGLLHISEVRKLAGGKRVENVEDVLGVGQKILVEI
TKIDDRGKLSLAPVLEEAADQEGRDAASHGSEAPAEG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccagagatcaagttcgccgaggcagtcctcgacaacggcaagtacggaacg
cgcacggtccggttcgaggccggccgcctcgcgcagcaggcgcagggcgcggtcgccgcg
tacctcgacgaggacaccatgctgctgtccgccacctcggtgggcaagcacccgaaggac
aacttcgacttcttccccctgaccatcgacgtcgaggagcgcagctacgccgcgggcaag
atccccggctcgttcttccgccgcgagggccgcccctccaccgaggcgatcctcgtctgc
cgcctcatcgaccggccgctgcgcccgtcgttcatcaccggcctccgcaacgaggtccag
gtcgtcatcaccgtcctcagcatcgcgccggacgagttctacgacagcctcgccatcaac
gcggcgagcgcctcgagcatgctctcgggcatcccgttctccggccccatcgcgggtgtg
cgcctcgcgctcatcggcgaccagtgggtcgtcttccccaagcactcgcagctcaaggag
gccgtcttcgacatcaccgtcgccggccgcgtcgtcaccgactccgagggcaacgaggac
gtcgcgatcatgatggtcgaggccgaggccaccgagggtgcctgggacctcatccagggc
ggcgccacgaagcccgacgaggccatcgtcgcgcagggcctcgaggccgcgaagccgttc
atccagcagctcgtcgccgcgcaggcctcgctcgcgcagcaggccgcgaagcccacggtc
gactaccccgtcttcctgccgtacgcgcaggagacatacgacgccgtcagcgcgctcgcc
ctcgacgagctcggcaccgtctaccagaccgccgacaagatcgagcgccaggacgccgac
gacgcgctcaagacccgcaccaaggaggccgtggccgccaaggtcgaggccggcgagctg
cccgcatcggcgctcaccgagttctccgcggcgtacaagtccgtcacgaagacggtcgtc
cgcggccgcatcctccgcgacggcatccgcatggacggccgcggcctcgcggacatccgc
ccgctcgacgccgaggtgcaggtcatcccgcgcgtccacgggtcggccatcttccagcgc
ggcgagacccagatcctgggcgtcaccacgctgaacatgctcaagatggagcagcagatc
gactcgctgagccccgtcacgaagaagcgctacctgcaccactacaacttcccgccctac
tccaccggtgagaccggtcgcgtcgggtcgccgaagcgtcgcgagatcgggcacggcttc
ctcgccgagcgcgccctcgtgccggtgctgccgagccgcgaggacttcccctacgcgatc
cgccaggtgtccgaggccctcgggtccaacggctccacctcgatgggctccgtctgcgcc
tcgaccctgtcgctgctgaacgcgggtgtgccgctgcgcgcgcccgtcgccggcatcgcc
atgggcctcgtctccgacaccgtcgacggccaggtccgctacgcggccctcaccgacatc
ctcggtgcggaggacgcgctcggcgacatggacttcaaggtcgccggcacgtcggagttc
gtcacggccatccagctggacacgaagctcgacggcatcccgacctcggtcctcgacggc
gcgctcaagcaggcgaaggaggcccgcacggccatcctcggcgtgctgaaccaggccatc
gacgcccccgacgagatggccccgaccgcgccccgcgtgatctcggtcaacatccccgtc
gacaagatcggcgagctgatcggcccgaagggcaagacgatcaacgccatccaggacgag
accggcgccgacatctccatcgaggaggacggcaccgtctacatcggtgccgtcgacggc
ccgtcggcggaggccgcgcgtgcgcaggtcaacgccatcgcgaacccgacgaaccccgag
gtcggcgagtccttcctcggcaccgtcgtcaagatcgcgacgttcggcgcgttcgtctcg
ctgctccccggcaaggacggcctgcttcacatcagcgaggtccgcaagctcgccggcggc
aagcgggtcgagaacgtcgaggacgtgctcggggtcggccagaagatcctggtggagatc
accaagatcgacgaccgcggcaagctgtcgctcgctcccgtgctggaggaggccgccgat
caggagggccgcgacgccgccagccacggctccgaggcgcccgcggagggttag
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