Clavibacter phaseoli: FGI33_04045
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Entry
FGI33_04045 CDS
T08435
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha00750
Vitamin B6 metabolism
cpha01100
Metabolic pathways
cpha01240
Biosynthesis of cofactors
Module
cpha_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
FGI33_04045 (pdxS)
Enzymes [BR:
cpha01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
FGI33_04045 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
TetR_C_27
OMPdecase
IGPS
DHO_dh
NanE
Glu_synthase
NMO
Motif
Other DBs
NCBI-ProteinID:
UKF36304
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All DBs
Position
871344..872246
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AA seq
300 aa
AA seq
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MTDTNTPGQVGSSRVKRGLAEMLKGGVIMDVVNAEQARIAEDAGAVAVMALERVPADIRS
QGGVARMSDPDLIDQIKAEVSIPVMAKARIGHFVEAQVLQSLEVDYIDESEVLSPADYVN
HIDKWGFTVPFVCGATTLGEALRRITEGAAMIRSKGEAGTGDVSEATKHIRTIKSEIRAL
SALTHDEIYVAAKELQAPYDLVLEVATTGQLPVVLFTAGGVATPADAAMMMQLGADGVFV
GSGIFKSGNPVARAKAVVTATALFNDPDAIAEASRGLGEAMVGINVADVPAPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaacacccccggacaggtcggctcgagccgcgtcaagcgcggactcgcg
gagatgctcaagggcggcgtcatcatggacgtcgtcaacgccgagcaggcgcgcatcgcg
gaggacgcgggagcggtcgccgtcatggctctcgagcgcgtccccgccgacatccgctcg
cagggcggcgtcgcccgcatgagcgaccccgacctcatcgaccagatcaaggccgaggtc
tccatccccgtcatggcgaaggcccgcatcggccacttcgtcgaggcgcaggtcctccag
tccctcgaggtcgactacatcgacgagtccgaggtgctgagcccggccgactacgtgaac
cacatcgacaagtggggcttcaccgtccccttcgtctgcggtgccaccacgctcggcgag
gcgctccgccgcatcaccgagggcgcggccatgatccgctccaagggcgaggccggcacg
ggcgacgtctccgaggccaccaagcacatccgcaccatcaagtccgagatccgcgcgctc
agcgccctcacgcacgacgagatctacgtcgccgcgaaggagctgcaggcgccgtacgac
ctcgtgctcgaggtcgccacgaccggccagctgcccgtcgtcctgttcaccgcgggcggc
gtggccaccccggcggacgccgcgatgatgatgcagctcggcgccgacggcgtgttcgtc
ggatccggcatcttcaagtcgggcaacccggtcgcgcgcgccaaggccgtcgtcaccgcg
accgcgctcttcaacgaccccgacgccatcgccgaggcgtcgcgcgggctgggcgaggcc
atggtcgggatcaacgtcgccgacgtccccgccccgcaccgcctcgccgagcgtggctgg
tag
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