Clavibacter phaseoli: FGI33_04260
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Entry
FGI33_04260 CDS
T08435
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FGI33_04260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_04260
Enzymes [BR:
cpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGI33_04260
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FGI33_04260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PSK_trans_fac
Motif
Other DBs
NCBI-ProteinID:
UKF36342
LinkDB
All DBs
Position
916237..918345
Genome browser
AA seq
702 aa
AA seq
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MTAADPAGCTASEAAGDAAPAGSLGARPPVARVMVDSPLPQLDRLFDYAVPEALRATCVP
GVRVRVPLRSAGRVADGYVVEMGDGQGYDGALSEVEQVVSPLPVLRPEIWTLAREVADRQ
AGTASDVIRLAVPPRQVRVEKAHVAALAAAAEEAAAHVAEPVADAAPVVDPAAPVVDPAA
LPPIDGYAPGTLDAAVDGSGRVAVDAVPAVVELPGGVWAGRWAVTLAQAAARVLASGRSS
VLVVPDYRDQDQLEAALAAHAPAGSVLRTDARQSGPDRYRSFLAGLGDAPRIVVGNRSAV
YAPAPRLGLVAMWDEGDPLHAEPLSPYAHARDVALLRSRQQGTALVLLAHSRSTEVERLV
AIGYLTSVSPVAVRTPRVIPTTSQTGDEGFARQARIPSGAWRAAKDAVEHGPVLIQVARP
GYAPLVACRACRQAARCTVCTGPLGMSTATSTPTCGWCGHLAGDWRCANCGSDELRLVTI
GAGRTAEELGRAFPGVQVVLADGERHVQEVDAESRLVVATRGAEPVAAGGYRAILLLDGE
RMLARESLRVGEDVLRQWSNAAALAAPRAPVMLVGVGGQVARALATWQQPRYAHEELLER
RALRFPPAVRAASVEGLPDAVGQAMERLDGLEGVDVLGPVPAEQGRVRAIVRLDYASGPD
AARELRAAVVRNASSRRKPVAGRTGFRPTVPLRVRFDDTGLF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggcggatccggccggctgcaccgcgtcggaggccgccggggacgccgcgccc
gccggctccctcggcgcgcgcccgcccgtggcgcgggtcatggtcgactccccgctgccg
cagctcgaccggctgttcgactacgccgtgcccgaggcgctccgggcgacgtgcgtgccg
ggcgtccgcgtgcgggtcccgctgcgctcggcgggacgggtggccgacggctacgtcgtc
gagatgggcgacggccagggctacgacggcgcgctcagcgaggtcgagcaggtcgtctcg
cccctgcccgtgctgcggccggagatctggacgctcgcgcgcgaggtcgccgaccggcag
gccgggaccgcgtccgacgtgatccggctggccgtgccgccgcgccaggtgcgcgtggag
aaggcgcacgtcgcggccctcgcggccgcggcggaggaggcggcggcacacgtcgccgag
cccgtcgcggacgccgctcccgtcgtcgatcccgcggctcccgtcgtcgaccccgccgcg
ctcccgccgatcgacggctacgcgccgggcacgctcgacgcggcggtcgacggatccggg
cgcgtggcggtcgacgccgtccccgcggtcgtcgagctgcccggcggcgtctgggccggc
cgctgggccgtgacgctcgcccaggccgccgcgcgcgtgctcgcgtcgggacgcagcagc
gtcctcgtggtgcccgactaccgcgaccaggaccagctcgaggccgccctcgccgcgcac
gcgcccgccggatccgtgctgcgcaccgacgcgcgccagtccggccccgaccgctaccgc
tccttcctcgcgggcctcggcgacgcgccccgcatcgtcgtcggcaaccgctcggccgtg
tacgcgcccgcgccgcgcctcggcctcgtcgcgatgtgggacgagggcgacccgctgcac
gccgagccgctcagcccgtacgcgcacgcccgcgacgtcgccctcctccgcagccgccag
cagggcacggcgctcgtgctgctcgcgcactctcggagcaccgaggtcgagcggctcgtc
gcgatcggctacctcacgagcgtctcgcccgtcgccgtccggaccccgcgggtgatcccg
accacctcgcagacgggcgacgaggggttcgcccggcaggccaggatcccctcgggcgcg
tggcgcgcggccaaggacgccgtcgagcacgggccggtcctcatccaggtcgcccgaccc
ggctacgcgccgctcgtcgcctgccgcgcctgccgccaggccgcccgctgcaccgtctgc
acgggcccgctcggcatgtccaccgccacgagcacgcccacgtgcggctggtgcgggcac
ctcgcgggcgactggcgctgcgcgaactgcggatccgacgagctgcgcctcgtcaccatc
ggcgcgggccgcacggcggaggagctcggccgcgcgttccccggcgtgcaggtggtgctg
gccgacggcgagcgccacgtgcaggaggtcgacgcggagtcgcggctcgtggtcgccacg
cgcggcgccgagccggtcgccgcgggcggctaccgcgcgatcctgctgctcgacggggag
cggatgctcgcgcgcgagagcctgcgggtgggggaggacgtgctccgccagtggtccaac
gccgccgccctcgccgccccgcgcgcgcccgtgatgctcgtgggcgtcggcgggcaggtc
gcgcgcgccctcgccacgtggcagcagccgcgctacgcgcacgaggagctgctcgagcgg
cgcgcgctccgcttcccgcccgccgtgcgcgcggcgagcgtcgaggggctgccggacgcc
gtcggccaggcgatggagcggctggacgggctcgagggggtcgacgtcctcggcccggtg
cccgccgagcagggccgcgtgcgcgccatcgtccgcctcgactacgcgagcggcccggac
gcggcgcgggagctgcgcgcggccgtcgtgcgcaacgcctcgagccgccgcaagcccgtc
gcgggccgcaccgggttccggcccaccgtcccgctccgtgtacggttcgacgacacgggg
ctgttctga
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