Clavibacter phaseoli: FGI33_07300
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Entry
FGI33_07300 CDS
T08435
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03420
Nucleotide excision repair
cpha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGI33_07300
03430 Mismatch repair
FGI33_07300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_07300
Enzymes [BR:
cpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGI33_07300
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGI33_07300
MMR (mismatch excision repair)
Other MMR factors
FGI33_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UKF36904
LinkDB
All DBs
Position
complement(1577123..1579045)
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AA seq
640 aa
AA seq
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MTDQLVPGTPGRDPYGSTAPGALPAPVSLGPASADEPEDTPVEEARTAESLLEALDDQQR
LAAQALLGPVVVLAGAGTGKTRAITHRIAYGIQAGVYPPNRVMALTFTSRAAAELRGRLR
ELGAGPVAARTFHAAALKQLNFFWPQVVGGTMPRLIESKGRMLGHAAESLRFRLDTAALR
DMAAEVEWRKVSMISIEQYGLAARTTRTLPPQLDADQAVALLQAYEDIKDQRRQLDFEDV
LLATAGMIEAEPWVAQQVREQYRFFVVDEYQDVSPLQQTILDLWMGDRRDLCVVGDASQT
IYSFAGAKSAYLLDFASRFPEATVVRLERNYRSTSGITEAANRLMRGRPGALTLVSADAD
PDGDGTGTASPAKGRGSAAVPGRGEGFRAPQVSAFPSDGAEARAIAGAIAQQIASGIAPE
DIAVLYRMNGQSAVLEQALGDAGVSYQVRGSQRFFDRPEIKQALLALRGASVSISGEPLF
KSVSDVLRGLGWSQQPPEQPGAVRDRWESLDAIMGLAERMPAGSTFRAFTDELLERQAGQ
HEPTVSAATLATLHSAKGLEWEHVYLMGLSEGLVPISYAQTLEAVDEERRLLYVGITRAR
SGLRLSWSRSGPQRSGQRDPSRFLAELDTRIAGGGAKRGA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccagctcgtccccggcacgcccgggcgcgacccctacgggtcgaccgcgcca
ggcgccctcccggcacccgtgtccctcggccccgcatccgcggacgagcccgaggacacg
cccgtcgaggaggcgcgcaccgccgagtcgctgctcgaggccctcgacgaccagcagcgc
ctcgccgcgcaggcgctcctcggcccggtcgtcgtgctcgcgggcgccgggacgggcaag
acgcgcgccatcactcaccgcatcgcgtacgggatccaggccggcgtctacccgcccaac
cgcgtcatggcgctcaccttcacctcgcgcgccgcggccgagctccgcggccgcctgcgc
gagctcggcgcgggacccgtcgccgcgcgcaccttccacgcggcggccctcaagcagctc
aacttcttctggccgcaggtggtcggcggcaccatgccgcgcctcatcgagagcaagggc
cggatgctcgggcacgccgccgagtcgctgcggttccgcctcgacaccgcggccttgcgt
gacatggccgccgaggtcgagtggcgcaaggtctcgatgatctccatcgagcagtacggc
ctggcggcgcgcacgacgcgcacgctgccgccgcagctcgacgccgaccaggccgtcgcg
ctcctccaggcctacgaggacatcaaggaccagcgccgccagctcgacttcgaggacgtg
ctgctcgcgaccgccggcatgatcgaggccgagccgtgggtcgcgcagcaggtgcgcgag
cagtaccgcttcttcgtggtcgacgagtaccaggacgtctcgccgctgcagcagacgatc
ctcgacctctggatgggcgaccgccgcgacctctgcgtcgtcggcgacgccagccagacc
atctactcgttcgcgggcgccaagagcgcgtacctcctcgacttcgcgtcgcgcttcccc
gaggcgacggtcgtgcggctggagcggaactaccggtcgacctccggcatcaccgaggcg
gcgaaccggctcatgcgcggccgcccgggcgcgctcacgctcgtctcggcggacgcggat
cccgacggcgacggcaccggcaccgcctcgcccgcgaaggggcgcggatccgccgccgtc
cccggccgcggcgagggcttccgcgcgccccaggtgagcgcgttcccgtccgacggcgcc
gaggcgcgtgccatcgccggcgccatcgcgcagcagatcgcctccggcatcgcgcccgag
gacatcgccgtgctctaccgcatgaacggccagtcggcggtgctcgagcaggcgctcggc
gacgcgggcgtgagctaccaggtgcgcggatcccagcgcttcttcgaccgccccgagatc
aagcaggcgctcctcgcgctgcgcggcgcgtccgtctcgatctccggcgagccgctcttc
aagtcggtgagcgacgtgctccgcggcctcggctggagccagcagccgcccgagcagccg
ggtgccgtgcgcgaccgctgggagtcgctcgacgcgatcatgggcctcgccgagcggatg
cccgcgggcagcaccttccgcgccttcaccgacgagctgctcgagcggcaggcgggccag
cacgagccgaccgtctccgccgccacgctcgcgacgctgcactccgccaagggcctcgag
tgggagcacgtctacctgatggggctgagcgaggggctcgtgcccatcagctacgcgcag
acgctcgaggcggtggacgaggagcggcgcctcctctacgtggggatcacgcgcgcgcgg
tccgggctgcggctctcctggagccggagcggaccgcagcgatccggtcagcgggatccg
tcgcggttcctggcagagctcgacacccgcatcgcgggtgggggcgcgaagcgcggcgcg
tga
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