Clavibacter phaseoli: FGI33_07315
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Entry
FGI33_07315 CDS
T08435
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpha
Clavibacter phaseoli
Pathway
cpha03420
Nucleotide excision repair
cpha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGI33_07315
03430 Mismatch repair
FGI33_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_07315
Enzymes [BR:
cpha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGI33_07315
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGI33_07315
MMR (mismatch excision repair)
Other MMR factors
FGI33_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Card1_endonuc
Motif
Other DBs
NCBI-ProteinID:
UKF38333
LinkDB
All DBs
Position
complement(1581138..1584359)
Genome browser
AA seq
1073 aa
AA seq
DB search
MISARRIAETLGLPSPTEQQRRVIESPLEPGLVVAGAGSGKTETMASRVVWLLANGHVGV
EEILGLTFTRKAAGELGVRIRARIEQLQQAGLAAVPADAFATPTVQTYNAFANGIFRDSA
TLIGREAESVVLTEASAWQLARRLVVESTDPRLLELGRGVDPITQAVISLSRAMSENVAD
PAEVVRLAGSFTGLAELPFGSARIRKAPAAEAVAAVGALPPLVDLAVRFQEEKTRRGLVE
YSDQVAFALAICERVPQVVAEHRKRFRVVLLDEYQDTSVVQTRLLATLFGGTPVMAVGDP
HQSIYGWRGASAANLARFGADFAPAGAAAADVPVYALSTSWRNPGAVLGAANRIVEPLTA
ASRIPVARLEPRPDAGDGRLDVAYEETVADEAAGVAAWFADRLRQTGSDGRPRSAAMLCR
SLKTIEPFTTALADRGVPFRVLGLGGLLDQPAVVDLVCVLRVLHDPTAGSELVRLLTGAR
WRIGTKDVHALSRVASWLMSRDHAQKPLAEEVRDGIRASVVPDEVGSVVDALDFVVGARD
GHTALAGFSEEGLARLRAVGRQLQVLRSRVGLDLVDLVTVVQQELLLDIEVAANETDPLG
RASLEAFTEQVAGYLQGDSAGTLGPFLAWLAEAERRDNLAPRTEEPEPGTVQILTIHGSK
GLEWDVVAVPRMVEGELPGTLREKRGWVAFGALPFEFRGDSAELPSLAWRGVETQREFQE
AMEAFGEELEERNAAEQRRLAYVAITRTRSDLLLTGSFWSTQQKPRDPGAFLREIQQVGL
IAPDALPEGTALEENPLEPGSARVAWPLPPLGPREARVRAAAEAVAVADPDAETVWTRDI
DLLLAERDARARDAELVDLPTRIPASRFKDFVSDPAGVAARLRRPMPERPYRQTRLGTLF
HGWVEARYGPAGTADVIDASGVELDADPTEPHVEQADLDRLRATFEASEWASRRPEEVEV
EIHMELAGQVVICKIDAVFLIDGRYRVVDWKTGRTPKDAADLELKQLQLALYRLAFAKWR
GIDPDLIDAEFYFVADDRSLKPERLYSEEDLVALWSGARTPDASRAPSGEIVG
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccggcgcatcgcggagacgctcggcctgccgagccccacggagcagcag
cggcgtgtcatcgagtcgcctctcgagcccggcctcgtggtcgcgggcgccggcagcggc
aagaccgagaccatggcgagccgcgtcgtgtggctgctcgccaacgggcacgtcggggtc
gaggagatcctcggcctcaccttcacgcgcaaggccgcgggcgagctcggggtgcggatc
cgcgcgcgcatcgagcagctgcagcaggccgggctcgcggccgtccccgcggacgcgttc
gcgacgcccaccgtgcagacctacaacgccttcgcgaacggcatcttccgcgacagcgcc
accctcatcggccgcgaggcggagtcggtcgtgctcacggaggcgtccgcctggcagctg
gcgcgccggctcgtcgtcgagagcaccgacccgcggctgctggagctcgggcgcggggtg
gatcccatcacgcaggccgtcatctccctcagccgggccatgagcgagaacgtcgccgac
ccggccgaggtcgtgcgcctcgccgggtcgttcacgggcctcgcggagctgcccttcgga
tccgcccgcatccggaaggcccccgcggccgaggcggtcgccgccgtcggcgcgctgccg
ccgctcgtcgacctcgccgtgcggttccaggaggagaagacccggcgcgggctcgtcgag
tacagcgaccaggtcgccttcgcgctcgccatctgcgagcgcgtgccgcaggtcgtcgcc
gagcaccggaagcggttccgcgtcgtgctgctcgacgagtaccaggacacctcggtcgtg
cagacccggctcctcgcgacgctcttcggcggcacgcccgtcatggcggtgggggatccg
caccagtccatctacggctggcgcggcgcgagcgcggcgaacctcgcgcgcttcggggcc
gacttcgcgcccgcgggcgccgccgccgcggacgtgcccgtctacgcgctgtccacgagc
tggcggaacccgggcgcggtcctcggcgccgcgaaccggatcgtcgagccgctcaccgcc
gcgtcgcggatccccgtcgcgcgcctcgagccccggcccgacgcgggggacggccgcctc
gacgtcgcgtacgaggagaccgtcgccgacgaggccgcgggcgtcgccgcgtggttcgcc
gaccggctgcggcagaccggatccgacggccgtccccgctcggccgcgatgctgtgccgc
tcgctcaagaccattgagccgttcaccacggcgctcgccgaccgcggcgtcccgttccgc
gtgctcggcctcggcggactgctcgaccagcccgccgtggtcgacctcgtgtgcgtcctc
cgcgtgctgcacgaccccaccgcgggcagcgagctcgtgcgcctcctcacgggcgcgcgc
tggcgcatcggtacgaaggacgtccacgcgctgtcccgcgtcgcctcctggctcatgtcc
cgcgaccacgcgcagaagccgctcgccgaggaggtccgcgacggcatccgggcctccgtg
gtgcccgacgaggtcggatccgtcgtcgacgcgctcgacttcgtggtcggcgcccgcgac
ggccacaccgcgctcgcgggcttcagcgaggagggcctcgcgcgcctccgcgccgtcggc
cgccagttgcaggtgctccgctcccgcgtcgggctcgacctcgtggacctcgtcacggtc
gtccagcaggagctgctcctcgacatcgaggtcgccgccaacgagacggatccgctcggc
cgcgcgagcctcgaggccttcaccgagcaggtggccggctacctccagggcgactccgcc
ggcacgctcgggccgttcctcgcctggctcgccgaggccgagcggcgcgacaacctggcg
ccgcgcaccgaggagccggagcccggcacggtgcagatcctcacgatccacggctcgaag
ggcctcgagtgggacgtcgtcgccgtgccgcgcatggtcgagggcgagctgcccggcacg
ctccgggagaagcgcggctgggtcgcgttcggcgccctcccgttcgagttccgcggcgac
tcggccgagctgccgtcgctcgcctggcgcggcgtcgagacgcagagggagttccaggag
gcgatggaggcgttcggcgaggagctcgaggagcgcaacgccgccgagcagcggcgcctc
gcgtacgtcgccatcacgcgcacgcgctcggacctgctgctcaccgggtcgttctggtcg
acgcagcagaagccgcgggatcccggggcgttcctccgcgagatccagcaggtgggcctc
atcgcgccggacgcgctgcccgaggggacggcgctcgaggagaacccgctcgagcccggc
tccgcgcgcgtcgcctggccgctgcccccgctcggcccgcgcgaggcccgcgtgcgcgcc
gccgccgaggcggtcgccgtcgcggacccggacgcggagaccgtctggacgcgcgacatc
gacctgctcctcgccgagcgcgacgcccgcgcccgcgacgcggagctcgtcgacctgccc
acgcgcatccccgcgtcgcgcttcaaggacttcgtgagcgaccccgcgggtgtcgccgcg
cgcctgcgccgccccatgcccgagcggccctaccggcagacccggctgggcacgctgttc
cacggctgggtcgaggcgcggtacgggcccgcgggcaccgccgacgtcatcgacgcgtcc
ggcgtggagctggacgcggatccgaccgagccgcacgtggagcaggcggacctggaccgg
ctgcgcgccaccttcgaggcgagcgagtgggcgagccggaggcccgaggaggtcgaggtg
gagatccacatggagctcgccggccaggtcgtcatctgcaagatcgacgcggtcttcctc
atcgacggccgctaccgcgtcgtcgactggaagaccggccgcaccccgaaggacgcggcc
gacctcgagctcaagcagctccagctcgcgctctaccgcctcgcgttcgcgaagtggcgc
ggcatcgaccccgacctcatcgacgcggagttctacttcgtcgcggacgaccggtcgctg
aagccggagcggctctactccgaggaggacctcgtcgcgctctggtcgggcgcgcgcacg
ccggacgcgtcgcgcgcgccgtcgggggagatcgtgggctga
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