Clavibacter phaseoli: FGI33_09220
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Entry
FGI33_09220 CDS
T08435
Name
(GenBank) PKD domain-containing protein
Organism
cpha
Clavibacter phaseoli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
Laminin_G_2
Laminin_G_1
Sde0182_C
InlK_D3
Rax2
GH115_C
Motif
Other DBs
NCBI-ProteinID:
UKF37250
LinkDB
All DBs
Position
complement(1999976..2006125)
Genome browser
AA seq
2049 aa
AA seq
DB search
MSIISTAGRRLAAMTAAAAVILSAVVIAQPALADSAPVDPTDPKTPVTVTADPLPTTQID
GVAWSQVVVGNTVYVAGKFQNARPAGAAAGTNLTPRSNLLAYDIRTGALITSFAPKLNAQ
ALSVTASPDGSRIYVVGDFTDVDGQGYYRAAAFSTATGKIIPSFRPIMGSQTRTVSASND
TVYLGGTFQSVNGAARKYLAAVSATDGSTKPFVADADTVVDALTLTKDASKLIVGGRFTQ
LSGTPTYGLGAVDPATGASLPWAANQQVKNAGTESSITSLYATDDRVYGSGYTFGNGGNL
EGAFSADPNTGVVNWVEDCHGDTYSVFATSKVAYVAGHPHYCGNIGGFPQTDPWTFQHSL
AFSKTATGTATADPYGYANWAGTPSPSLLNWFPKYVTGSFTGQGQAAWSVNGNEDYIVVG
GEFPFVNTTAQQGLVRYAMAKDAPNKVGPNGNDQLVPKSISYTKGEARVSWQATFDRDNS
RLTYKVIRDGKTATPVYQVTQDSTFWNRPSMGFIDKGLVPGSSHTYKVVVTDSSGNSTDR
NGASPVTVTDQSGSDAYATSVKDDGATAYYPLDEKDGTAGLDHVAFEDLRVDNATRGAAG
PIDGSTATTFSGQDGSFAVTPQAVQAPDTFSVESWVKTSSTNGGKVVGFGGSNTGTSGNY
DRMVYLDNDGRVLFGVYTGATQTLSSAPGFNDGKWHQIVATMGAEGMKLFVDGKLAGQRA
DTTRGQDYKGYWRVGGDNLGGWPNQPRSYYLAGDIAQVSIYPTALTRADVVDHLVASGRT
SPIPPAPSDAYGKAVYAADPSSYWRLDDADGSSTLKDAGQNDVGANVGRNVRFGQAGALS
GSVGQAAAFSDSIAVSQQRVANPTSYSLEMWFQTTTTRGGKLIGFGDNADPFNFSGSYDR
HVYMQDDGRLQFGTWTGQTNLASSPRAYNDGQWHHMVASQGSDGLKLYVDGDLVGQNGQT
QAQAYDGYWRIGGDNTWGSSSGTFEGRMDEVAVYPTVLAASTIATHYSLGTTGRVPNQAP
KAAFTQTADFLTASFDATGSTDTDGTVTGYAWDFGDGVQASGATQSHTYAAAGTYPVVLT
VTDDRGTTNRTQQDVTVKAAPANIAPTAVVTATATDLTAKLDGSASTDADGTVASYAWDF
GDGGTGTGPTPTHAYAAGGTYTVTLTVTDDKGLTGTASTQVQVTAPPVNREPTAVIASTT
TDLVANLDGRGSSDPDGTIASWAWEFGDGTTGTGASIAHPYAKAGTYTVALTVTDDKGAT
GRTTASVTVTAPPVNQAPVAAFTSTVANLVASLDASTSSDPDGTVASYAWAFGDGTTGTG
RTTTHAYAAAGTFAVSLTVTDDKGLATTTTSQVTVQAPASNVLAQDSFGRTLATGWGTAD
LGGAWRVTGGTNIVKVQDGTGQVVSPKGETRTMTLDAVSTTSSDVSATFSLDSVPTGGGS
YTRVNSRQVGSAFYQTQVWIKATGQIQLVQSEGATTIGSYILPGTTYQAGQQLRVRVLTT
GTSPTTVKAKVWVAGQAEPAAWQTSVTSSTAALQAAGSVGIQTYLSGSATAPVTTRIDDL
VVARDGQAPAANQAPTAAFTSTAKDLTASFDGSGSTDADGTVASYAWAFGDGTTGTGRTA
THAYAAAGTYAVSLTVTDDKGLVSAKKDGTVTVTAPVAANQAPTAAFTSTAKDLTASFDG
STSTDADGTVASYAWAFGDGTTGTGKTVDHAYAAAGTYAVSLTVTDDKGLVSAKKDGTVT
VTAPVVTPANQAPTAAFTSTAKDLTASFDASTSTDADGTVASYAWAFGDGTTGTGRTATH
AYAAAGTYTVSLTVTDDKGLASAKKDGTVTVTAPVVTPPATGILAQDTFTRTAANGWGTA
ETGGAWRITGNASILKVQDGKAQVASPAGETRTASLDAVSTTTSDAQVSFALDKVPTGGG
AYVRINSRQVGTSFYQTQVWVRSTGQVMIVQSENGTNLKSVVVPNLTYTAGQQLRVRVQV
TGTSPTTMNAKVWPVGQAEPTAWQSTTTGTLAALQTAGTFGIQTYLSSSATAPVAFTLDD
LLVTDGTAR
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatctccaccgcgggacgccgcctggccgcgatgaccgcggccgccgcggtc
atcctgtccgcggtcgtgatcgcgcagcccgccctggcggactccgcgccggtcgacccg
accgaccccaagacgcccgtcacggtcaccgccgacccgctgcccacgacccagatcgac
ggcgtcgcctggtcgcaggtcgtcgtcggcaacacggtctacgtcgccggcaagttccag
aacgcgcgccccgcgggcgccgcggccggcacgaacctcacgccgcgcagcaacctcctc
gcgtacgacatccgcacgggcgcgctcatcacgtccttcgcgccgaagctcaacgcgcag
gcgctctcggtcaccgcgtcgcccgacggctcgcggatctacgtggtcggcgacttcacc
gacgtcgacggccagggctactaccgcgccgcggcgttcagcaccgcgaccggcaagatc
atcccctccttccgccccatcatgggcagccagacccgcacggtgagcgcctcgaacgac
accgtgtacctcggcgggaccttccagagcgtcaacggcgccgctcggaagtacctcgcc
gcggtgtccgcgaccgacggcagcacgaagccgttcgtcgcggacgcggacaccgtcgtg
gacgcgctcaccctcaccaaggacgcgtccaagctcatcgtcggcggccgcttcacgcag
ctgtcgggcacgccgacctacgggctcggcgcggtcgatcccgccacgggcgcctcgctc
ccgtgggccgcgaaccagcaggtcaagaacgccggcaccgagtcgtcgatcacgagcctg
tacgcgaccgacgaccgggtctacggatccggctacacgttcggcaacggcggcaacctc
gagggcgccttctcggccgacccgaacacgggcgtcgtgaactgggtcgaggactgccac
ggcgacacctactcggtcttcgcgacgagcaaggtcgcgtacgtcgcgggccacccgcac
tactgcggcaacatcggcggcttcccgcagacggacccgtggaccttccagcacagcctc
gcgttctccaagaccgcgaccggcacggccacggccgacccgtacggctacgcgaactgg
gccggcacgccgtccccgtcgctgctcaactggttcccgaagtacgtgaccggctccttc
acgggacagggccaggcggcctggagcgtcaacggcaacgaggactacatcgtcgtcggc
ggcgagttcccgttcgtgaacaccaccgcgcagcagggcctcgtccgctacgccatggcc
aaggacgccccgaacaaggtcggcccgaacggcaacgaccagctcgtccccaagtcgatc
tcgtacacgaagggcgaggcccgcgtctcctggcaggccaccttcgaccgcgacaactcg
cgcctcacctacaaggtgatccgcgacggcaagaccgcgacgcccgtctaccaggtcacg
caggactcgaccttctggaaccggccgtcgatgggcttcatcgacaagggcctcgtgccc
ggcagctcgcacacctacaaggtcgtcgtgaccgactcctcggggaactccaccgaccgc
aacggcgcctcgcccgtcaccgtcaccgaccagtcgggcagcgacgcgtacgccacgagc
gtgaaggacgacggcgcgaccgcgtactacccgctcgacgagaaggacggcaccgccggc
ctcgaccacgtcgcgttcgaggacctccgcgtcgacaacgccacgcgcggcgccgcgggc
ccgatcgacggatccaccgccaccaccttctccggccaggatgggtccttcgcggtcacg
ccccaggccgtgcaggcgccggacacgttcagcgtcgagtcgtgggtcaagacgtcctcg
acgaacggcggcaaggtcgtcggcttcggcggcagcaacacgggcacgtcgggcaactac
gaccgcatggtctacctcgacaacgacggccgcgtcctcttcggcgtctacacgggcgcg
acccagaccctgagctcggcccccgggttcaacgacgggaagtggcaccagatcgtcgcc
accatgggcgccgagggcatgaagctgttcgtggacggcaagctcgccggccagcgcgcg
gacaccacgcgcggccaggactacaagggctactggcgcgtcggcggcgacaacctcggc
ggctggcccaaccagccccggagctactacctggccggcgacatcgctcaggtgtcgatc
tacccgaccgccctcacgcgcgccgacgtcgtcgaccacctggtcgcgtccggccgcacc
tcgcccatcccgccggcgccctcggacgcctacggcaaggcggtctacgcggccgacccg
tcctcctactggcgcctcgacgacgccgacggctcgtcgacgctcaaggacgcgggccag
aacgacgtcggcgccaacgtcggacgcaacgtgcgcttcggccaggcgggcgccctctcg
ggctccgtcggccaggcggcggcgttctccgacagcatcgcggtgagccagcagcgggtc
gcgaacccgacctcctactcgctcgagatgtggttccagacgaccaccacgcgcggcggc
aagctgatcggcttcggcgacaacgcggatccgttcaacttctccggcagctacgaccgc
cacgtctacatgcaggacgacggacgcctgcagttcggcacgtggacgggccagaccaac
ctcgcgagctcgccccgcgcctacaacgacggccagtggcaccacatggtcgcgtcgcag
ggatccgacggcctgaagctctacgtggacggcgacctcgtcggccagaacggccagacg
caggcgcaggcctacgacggctactggcgcatcggcggcgacaacacgtggggctcctcc
agcggcaccttcgaggggcgcatggacgaggtcgcggtctacccgaccgtgctcgcggcc
agcaccatcgcgacgcactactccctcgggacgaccggccgcgtgccgaaccaggccccc
aaggccgcgttcacgcagaccgccgacttcctgacggcgtcgttcgacgcgaccggatcc
acggacaccgacggcacggtcacgggctacgcctgggacttcggcgacggcgtccaggcg
tccggtgcgacccagtcgcacacgtacgccgcggcgggcacctacccggtggtcctcacg
gtgacggacgaccgcggcaccacgaaccgcacgcagcaggacgtcacggtgaaggcggcc
cccgccaacatcgcgccgaccgccgtcgtgacggccacggcgaccgacctcacggccaag
ctcgacggatccgcatcgacggacgccgacggcaccgtcgcctcctacgcgtgggacttc
ggcgacggcggcacgggcaccggcccgacgccgacgcacgcctacgccgcgggcggcacc
tacacggtgacgctgacggtcacggacgacaagggcctcacgggcaccgcgtccacgcag
gtccaggtcacggcgcccccggtcaaccgggagcccaccgcggtcatcgcgtccaccacg
accgacctcgtcgcgaacctcgacggccgcggatccagcgacccggacggcaccatcgcg
tcctgggcgtgggagttcggcgacggcacgaccggcaccggggcctccatcgcccacccg
tacgcgaaggccggcacctacacggtcgcgctgacggtgacggacgacaagggcgcgacc
ggtcgcacgaccgcgagcgtcacggtcaccgccccgcccgtgaaccaggcgcccgtcgcc
gcgttcacgagcaccgtggcgaacctcgtcgcctcgctcgacgcctccacgtcgagcgac
cccgacggcaccgtggcgtcctacgcctgggccttcggtgacgggaccaccggcacgggc
cgcaccacgacccacgcctacgccgcggccggcaccttcgcggtgtcgctcacggtcacg
gacgacaagggcctcgccacgacgaccacctcgcaggtgaccgtccaggcgcccgcgtcg
aacgtgctggcgcaggactcgttcggccgcaccctcgcgacgggctggggcacggccgac
ctcggcggcgcctggcgcgtcaccggcggcacgaacatcgtcaaggtgcaggacggcacg
ggccaggtcgtctcgcccaagggcgagacccgcacgatgaccctcgacgcggtctccacc
acgtcgtcggacgtcagcgcgaccttctcgctcgactccgtccccacgggcggcggctcc
tacacccgggtcaactcccgccaggtgggctcggccttctaccagacgcaggtctggatc
aaggcgaccgggcagatccagctggtgcagtcggagggggcgacgaccatcgggtcgtac
atcctccccggcacgacctaccaggccggccagcagctccgcgtccgcgtcctgacgacc
ggcacctcgccgaccaccgtcaaggccaaggtgtgggtcgccggccaggccgagcccgcc
gcctggcagacgagcgtcaccagctcgaccgccgcgctgcaggccgccggctccgtcggg
atccagacctacctctcggggtcggcgacggctcccgtcacgacgcggatcgacgacctg
gtcgtcgcccgcgacggccaggcgcccgccgccaaccaggccccgacggcggcgttcacg
tcgaccgccaaggacctgacggcctcgttcgacggatccggctcgacggacgccgacggc
acggtcgcctcgtacgcctgggcgttcggggacgggaccacgggcacgggccgcaccgcg
acccacgcctacgccgcggccggcacctacgcggtctcgctcacggtgacggacgacaag
ggcctcgtctcggcgaagaaggacggcaccgtcacggtgaccgctcccgtcgcggcgaac
caggccccgacggcggcgttcacgtcgacggccaaggacctgaccgcctcgttcgacgga
tccacgtcgaccgacgccgacggcacggtcgcgtcctacgcctgggcgttcggcgacggg
acgacgggcaccggcaagacggtggaccacgcctacgccgccgcgggcacctacgcggtg
tcgctcacggtgacggacgacaagggcctcgtgtcggcgaagaaggacggcacggtcacc
gtgaccgccccggtcgtcacgccggccaaccaggccccgacggcggcgttcacgtcgacc
gccaaggacctgacggcctcgttcgacgcatccacgtcgaccgacgcggacggcaccgtc
gcctcctacgcctgggcgttcggggacggcacgacgggcacgggccgcaccgcgacccac
gcctacgccgccgcgggcacctacacggtgtcgctcacggtcacggacgacaagggactg
gcgtcggcgaagaaggacggcaccgtcacggtgaccgccccggtcgtcacgccgcccgcc
accgggatcctcgcgcaggacaccttcacccgcaccgccgccaacggctggggcacggcg
gagaccggaggcgcctggcgcatcacgggcaacgcgtcgatcctcaaggtgcaggacggg
aaggcgcaggtcgccagccccgcgggcgagacccgcaccgccagcctcgacgccgtgagc
accaccacctcggacgcccaggtgagcttcgcgctcgacaaggtgcccacgggcggcggc
gcgtacgtgcggatcaactcgcgccaggtcggcacgtcgttctaccagacgcaggtctgg
gtgcggtcgaccggccaggtcatgatcgtgcagtccgagaacggcaccaacctgaagtcg
gtggtcgtcccgaacctcacgtacacggccgggcagcagctgcgggtccgcgtgcaggtc
acgggcacgtcgcccaccacgatgaacgcgaaggtctggcccgtcggccaggccgaaccg
accgcgtggcagtcgacgacgaccgggaccctggccgcccttcagaccgcggggacgttc
gggatccagacctacctgtcgagctcggcgaccgcgccggtcgcgttcacgctcgacgac
ctgctggtgacggacggcacggcccggtga
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