Clavibacter phaseoli: FGI33_09950
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Entry
FGI33_09950 CDS
T08435
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpha
Clavibacter phaseoli
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpha03400
]
FGI33_09950
DNA repair and recombination proteins [BR:
cpha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FGI33_09950
Archaeal homologous recombinant proteins
FGI33_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UKF37383
LinkDB
All DBs
Position
2167309..2170326
Genome browser
AA seq
1005 aa
AA seq
DB search
MDLHRLTLRAIGPFAGEHVIDFAELGRSGLFLLEGPTGSGKSTLIDAVVFALYGSLASDG
SSRDRLHSHHAAPGVEPYVELVFETAAGIHRVRRSPQHQRPKARGTGTTNQNATATLVRL
SSPDADAGEVVGTSTQEVGTEIARIVGLTRAQFVQTVVLPQGEFAEFLRSTGEQRRLVLQ
SLFGTAVYERTARQLAEMRTAAKARTDAADARVAEALTGLREATRVDALEVADAPDTVRL
LAELADAAEEARAEDERARIAAADALADAERVSRGLDRRRALIAREGAVRAEAEDVAGLA
RRAEEARRAAAVAGPLAARDRADAARAAAEDADEAARAVCRAERPALAAADAPALAERRD
ALVAELTTLADAEARERGLPRRRADVRAAEDAVAAREAAVEEAEAALQERPAGREPLVEA
RDAAADAAGGVDAARAALAEAEAIRRRVTELQELAARILAAHDALDARSAAAATAVRHEA
ELRQRKIRGLAGELARELEDGAPCPVCGAVDHPHPAPSAPGHPDDDEIERAAEERARGER
AQGDAVAALAAETARHEVAQAALGGITEEAADAEVVSRAARLAEAEGAGGALRAAEAAVV
AHDAETEGIRARRDDARAALSGLRERVIRARELLAEDQAAVRAVLAEREADAPETDTADG
DAADAPRVAALVADRAAERAVVDRLIALAAARERTAADAAARAAELAQALDDQAFPTEAE
ARAAALPPAELEAAARRVSAHEREQAVVAEGLADPEVASLTGAEDPDPDAARAARDAAQA
AARTSAERAARARDRADRSASALARHDAARRESARAGDQARATIRMAEVANAITPENTRG
TTLGTYVLLRRFEDVVRAANARLRVMSSGRYELEVSEEREATSRSRKTGLALQIRDHVVD
RVREPASFSGGETFYASLALALGLADVVQAEAGGLQLGTLFVDEGFGTLDPETLDAVMSE
LGRLSSDGRTVGIVSHVEELKQRVADRIEVRRRADGSSTLTSTVS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcaccgcctcaccctgcgcgccatcggacccttcgccggcgagcacgtgatc
gacttcgcggagctcggccggtcggggttgttcctgctcgaggggcccaccggatccggc
aagtcgacgctcatcgacgccgtggtcttcgcgctctacgggtcgctcgcgagcgacggg
tcgagccgcgaccggctgcacagccaccacgcggcgcccggcgtggagccgtacgtggag
ctcgtgttcgagacggccgcggggatccaccgggtgcgccggagcccgcagcaccagcga
ccgaaggcccgcggcacgggcaccacgaaccagaacgcgaccgcgacgctcgtgcggctg
tcgtcgccggatgccgacgccggtgaggtcgtgggcaccagcacgcaggaggtgggcacg
gagatcgcgcgcatcgtcggcctgacgcgcgcgcagttcgtgcagaccgtcgtgctgccg
cagggcgagttcgccgagttcctgcggtcgacgggcgagcagcggcggctcgtgctgcag
tcgctgttcggcacggccgtctacgagcggaccgcgaggcagctcgccgagatgcgcacg
gccgcgaaggcgcgcaccgacgccgccgacgcgagggtcgccgaggcgctcaccgggctc
cgcgaggcgacgcgggtggatgcgctggaggtcgccgacgcccctgacaccgtgcggctg
ctggccgagctggcggacgcggcggaggaggcgcgggccgaggacgagcgggcgcggatc
gcggcggcggacgcgctggccgacgccgagcgggtgtcgcgggggctcgatcgacgacgc
gcgctgatcgcgcgcgagggggccgtgcgcgcggaggccgaggacgtcgccgggctcgcg
cgacgcgcggaggaggccagacgcgcggcggcggtcgccggtcccctggccgcgcgcgac
cgggcggatgcggcgcgggccgcggccgaggacgccgacgaggcggcccgcgcggtctgc
cgcgcggagaggccggccctggccgccgccgatgccccggcgctcgccgagcggcgcgac
gcgctcgtggccgagctgacgacgctggcagacgccgaggcgcgcgagcgcgggctgccg
cgccgccgcgccgacgtgcgggccgccgaggacgcggtcgcggcgcgcgaggccgccgtg
gaggaggcggaggcggcgctccaggagcggccggccgggcgggaaccgctggtcgaggcc
cgggacgccgcggcggatgcggcgggcggggtcgacgcggcgcgcgcggcgctcgcggag
gcggaggcgatccggcgtcgcgtgacggagctccaggagctggcggcgcggatcctcgcg
gcgcacgatgccctcgacgcgcgctcggccgcggcggcgaccgccgtgcgccatgaggcg
gagctgcggcagcggaagatccgcgggctcgcgggcgagctggcccgggagctcgaggac
ggcgcgccgtgcccggtgtgcggcgcggtcgaccacccgcatccggcgccgagcgcgccc
gggcacccggacgacgacgagatcgagcgggcggccgaggagcgcgcccggggcgagcgg
gcgcagggcgacgcggtcgcggcgctcgcggcggagaccgcgcggcacgaggtggcgcag
gcggcgctgggcgggatcaccgaggaggccgccgacgccgaggtcgtctcgcgcgccgcg
cgcctcgcggaggccgagggggccggcggcgcgctccgggcggccgaggcggcggtcgtc
gcccacgacgccgagaccgaggggatccgcgcccgccgggacgacgcccgcgccgcgctc
tcggggctgcgcgagcgcgtgatccgggcgcgggagctcctcgcggaggaccaggcggcc
gtgcgcgcggtgctggccgagcgggaggcggacgcgcctgagaccgacaccgccgacggg
gacgccgccgacgcgccccgcgtcgccgccctggtcgccgaccgcgccgccgagcgcgcc
gtcgtcgaccgcctcatcgccctcgccgccgcccgcgagcgcacggccgccgacgccgcc
gcgcgcgccgcggagctcgcgcaggcactcgacgaccaggcgttcccgaccgaggccgaa
gcgcgcgccgccgccctcccgccggccgagctcgaggccgccgcccggcgggtctccgcg
cacgagcgcgagcaggcggtcgtcgcggaggggctcgcggatcccgaggtcgcgtcgctc
acgggcgccgaggacccggatccggacgccgcccgcgccgcccgcgacgccgcgcaggcc
gccgcgcgcacgagcgccgagcgcgccgcccgcgcgcgcgaccgcgccgaccgcagcgcg
tccgccctcgcccgccatgacgccgcccgccgcgagagcgcccgcgcgggcgaccaggcg
cgcgcgacgatccgcatggcggaggtagcgaacgccatcacccccgagaacacgcgcggc
acgacgctcggcacgtacgtgctgctgcgccgcttcgaggacgtggtgcgggccgccaac
gcgcgcctgcgggtcatgtcgagcgggcgctacgagctggaggtgagcgaggagcgggag
gcgacgagccggtcgcgcaagaccgggctggcgctgcagatccgcgaccacgtcgtcgac
cgcgtgcgcgagcccgcgagcttctcgggcggcgagacgttctacgcctcgctcgccctc
gcgctcggcctcgccgacgtcgtgcaggccgaggcgggcgggctgcagctcggcacgctc
ttcgtcgacgagggcttcggcacgctggatccggagaccctcgacgccgtcatgtccgag
ctcgggcgcctctcctccgacggccgcacggtcggcatcgtcagccacgtcgaggagctc
aagcagcgcgtggcggaccggatcgaggtccggcgccgggcggacgggtcgtcgacgctc
acgtcgacggtcagctga
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