Clavibacter phaseoli: FGI33_10555
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Entry
FGI33_10555 CDS
T08435
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cpha
Clavibacter phaseoli
Pathway
cpha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpha00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FGI33_10555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpha03021
]
FGI33_10555
Transcription machinery [BR:
cpha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FGI33_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KORA
HNH_repeat
Phage_CP76
Motif
Other DBs
NCBI-ProteinID:
UKF37497
LinkDB
All DBs
Position
2284529..2285572
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AA seq
347 aa
AA seq
DB search
MTMTPTRPTAADTTSDAALDQVESVGPVDPYADSDLPEPSLVTPGASTDAVKDYLRQIGR
VPLLTAEQEVTVARRIEVGVLSQEVLDTRTDLTPAERREYQTLAQDGMRAKQHLVNANLR
LVVSIAKRYTGRGLPFLDLIQEGNMGLVRAVEKFDYQAGFKFSTYASWWIKQSITRGMAD
TSRTIRIPVHTVEHINRINAVQRELAVELGRDPSMEEIARESDTPVTKVRYLLDRAQEPM
SLQVLVGGSGGDGDTEMADLIEDADVTQPIDVVTQQLMAAHVMRLIDGLAERDAEVVRMR
FGLAGLEPRSLAFVSQQLGVTRERVRQIEKKVLAKLRIPELETYIRG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacaccgaccaggcccacggccgccgacaccacctccgacgccgccctcgac
caggtcgagtccgtcggccccgtcgatccctacgcggactccgacctccccgagccctcg
ctcgtcacccccggcgccagcaccgacgccgtcaaggactacctccgccagatcggccgc
gtgccgctgctcaccgccgagcaggaggtgaccgtcgcccgccgcatcgaggtgggcgtg
ctgtcgcaggaggtcctcgacacccgcaccgacctcaccccggccgagcgccgcgagtac
cagacgctcgcccaggacgggatgcgcgccaagcagcacctcgtcaacgcgaacctgcgc
ctcgtcgtcagcatcgccaagcgctacacgggccgtggcctgccattcctggacctcatc
caggagggcaacatgggcctcgtccgcgccgtcgagaagttcgactaccaggcgggcttc
aagttctcgacctacgcgtcgtggtggatcaagcagtccatcacccgcggcatggccgac
acgagccgcaccatccggatccccgtgcacacggtggagcacatcaaccggatcaacgcc
gtgcagcgcgagctcgcggtggagctcggccgggacccctccatggaggagatcgcgcgc
gagtcggacacgcccgtcactaaggtgcgctacctgctcgaccgcgcgcaggagcccatg
tcgctgcaggtcctcgtgggcggcagcggcggcgacggcgacaccgagatggccgacctc
atcgaggacgccgacgtcacgcagcccatcgacgtggtgacgcagcagctcatggccgcg
cacgtcatgcgcctcatcgacgggctcgccgagcgcgacgccgaggtcgtccggatgcgc
ttcggcctcgccggcctcgagccgcgctcgctcgccttcgtgagccagcagctcggcgtg
acgcgcgagcgcgtgcgccagatcgagaagaaggtgctcgcgaagctccgcatcccggag
ctggagacgtacatccgcggctga
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