Clavibacter phaseoli: FGI33_15270
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Entry
FGI33_15270 CDS
T08435
Name
(GenBank) conjugal transfer protein, Dtr system
Organism
cpha
Clavibacter phaseoli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
TraI_hel_assoc_N
DEAD
AAA_22
Homeodomain
HTH_20
PIF1
Rad17
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
UKF38521
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Position
pCP:complement(99277..103101)
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AA seq
1274 aa
AA seq
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MTMHILSAGDGYAYYTSEIATGDVPREAGRELGDYYTAEGNPPGVWMGSGLDALGVSGAV
TDEQMKALYGEGLHPDAERIIAEAQAAGASVDEATAAAKLGRAYYAYGAGGSDLREKIDE
GYARFERMNHREPDAAERRAIRAREGARAFRAAKGREPADAEELGRYITAASRPTQQAVA
GFDLVFSPAKSVSTLWGLGDDETRRAIEQAHEDAIADTVKYLEREALATRAGRNGVAQID
VDGGIIATRFRHYDSRTGDPQLHDHLVVANKVKGSDGKWRTIDSKLLHRQGVAASEFYNS
RVMERVCDALGVTTEHRVVTAGKRPVVEIAGIDQGLLVGFSTRSTDIRKQLAKLEREYTA
EHARTPNQAARIKLAQQATLDTRPMKDSGRSLAALRDAWRARATEAVGRRTVRGLLASAR
AAAKDRAETARDPEALDVDEAARQVVEAVSEYHPVWGPHMIEAEARRYIQGARIAGIDVP
EDAAEAITRRALGTDSLALTPDGPHGAFAPLTRRDGTSIYEHKGRQLFTSSTVLEAEDLL
LDAARDRTVRPVSRDTFDRIAEEEQASSAHKLDAGQLALAGEFATSSTRLLVGSGPAGTG
KTTALRITARAVEAEGGRLVALAPSAAAAQVIADALEVSAHTIHSFTYGLGSLAELNRHE
GPIEGVDLSPGDVIVVDEAGMAGTVNLAKVVRAAELHGAHVRLIGDDRQLAAVEAGGALR
LLERDVGSIKLDTIHRFRNPDGSTNTAEAAASERLRDPLQAGNPFAWYLGQGRIIAGDVD
LMTGAVFGAWQDDVLAGKQSVMLAQRNETVAELNGRAQAFRMSDGTVTGRARAHLRDGLS
AHRGDLIVSRVNSHELRTDRGRDRVKNGDRWSVDQVLRDGSLAVTHLGHGGRVVLPAEYV
ASSVELGYAATVHRAQGLTADTSHVLADSSTTRAMAYVAMTRGKESNRLYVEANDAQTMG
DVLEQIANNSNGMLSAHETIRAEQTRVGDLVTLVDQYQDVAERADATRFERIARQAVGRR
IARELLADEAWGALESALRRAERGGYDPVDALYQAWEKDTLDNARNKPAVLASRVDVDVR
AYTNAFPPEPREEAVPTWIADRAPIHSRHTDPAWRAHLAERYDYLAARLEERGDTLAAEQ
PAWAKDLGAVPEDERRADWTRLAAEVDLFRRRYGIDERELDAVPVACREKTLGAELQSRV
TDLHKATALRQRAAAAPLTLADRLREQKRVEAEARLEQLRRAGLIARAKSCDTIDPEYPS
RDKDGARGDDGREF
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcacatcctttccgcgggggacgggtatgcgtactacacgagcgaaatcgcg
accggtgatgtgccccgggaagcgggccgtgagctcggcgactactacaccgcggagggc
aaccctcccggcgtctggatgggctctgggctcgacgcgctgggcgtctcgggcgcggtc
accgatgagcagatgaaggcgctttacggcgagggactgcaccctgacgcggagcgcatc
atcgccgaagcgcaggccgccggcgcgagcgtggacgaggcgaccgcggcagccaagctc
ggccgcgcgtactacgcctatggcgccggcggtagcgacctccgcgagaagatcgacgag
ggatacgcccgcttcgagcgcatgaaccaccgcgagcccgacgccgccgagcgccgcgcc
atccgcgcccgcgagggcgcgcgggcgttccgggccgcgaagggccgcgagcccgcggat
gcggaggagctcggccggtacatcaccgccgcgtcgcgtccgacgcagcaggccgtggcc
ggcttcgacctcgtgttctcccccgccaagagcgtctccacgctgtggggcctcggcgac
gacgagacccgccgcgcgatcgagcaggcccacgaagacgccatcgccgacacggtgaag
tacctcgagcgcgaggcccttgccacgcgcgccggccgcaacggcgtcgcgcagatcgac
gtcgacggcgggatcatcgcgacccggttccggcactacgactcccgcaccggcgacccg
cagctgcacgaccacctcgtcgtcgcgaacaaggtcaagggctccgacggcaagtggcgc
accatcgactccaagctcctccaccgccagggcgtggccgcatccgagttctacaactcg
cgcgtgatggagcgggtttgtgacgccctcggcgtcaccaccgagcaccgcgtcgtaacc
gccggcaagcgacccgtggtcgagatcgcgggcatcgatcagggcctcctcgtaggcttc
tcgacccgctcgaccgacatccgcaagcagctcgccaagctcgagcgggagtacaccgcc
gagcacgcgcgcacccccaaccaggcggcccgcatcaagctcgcgcaacaggcgaccctc
gacacccgccccatgaaggacagcggccgatccctcgccgcgctccgcgacgcgtggcgc
gcacgagcgaccgaggctgtcgggaggcgcacggtacggggccttctcgcgagcgcacgg
gcggccgcgaaggaccgcgccgagaccgcccgagacccggaggcgctcgatgtcgacgag
gcagccaggcaggtcgtggaggcggtgtccgagtaccaccccgtctggggcccgcacatg
atcgaggccgaggcacgccgctacatccagggcgcgcgcatcgccggcatcgacgtccct
gaggacgccgcggaggccatcacccgccgcgcgctcggcacggactccctcgccctcacc
ccggacggcccgcacggcgcattcgccccgctcacgcgccgcgacggcaccagtatctac
gagcacaagggccggcagctcttcacctcgagcaccgtcctcgaggcggaagacctgctg
ctggacgccgcccgcgaccgcaccgtccgacccgtcagccgcgacaccttcgaccgcatt
gccgaggaggaacaggccagcagcgcacacaagctcgacgccggacagctcgccctcgcc
ggggagttcgcgacatccagcacccgcctgctcgtcggatccggccctgccggcaccggc
aagaccacggcactccgcatcaccgcgcgcgcagtcgaggccgagggcggccggctcgtc
gcgctcgccccgtcggccgccgccgcgcaggtcatagccgacgcgctcgaggtctccgcc
cacaccatccactcgttcacctacggtctcgggtcgctcgctgagctcaaccgacacgag
ggcccgatcgagggcgtcgacctctcccccggagacgtgatcgtcgtcgacgaggccggc
atggccggcaccgtcaacctcgccaaggtcgtccgtgccgccgaactccacggcgcccac
gtccggctcatcggcgacgaccgccagctcgccgccgtcgaagccggcggcgcactccgc
ctcctcgagcgcgatgtcgggtccatcaagctcgacaccatccaccgcttccggaacccc
gacggcagcacgaacaccgccgaggcggcagcctcggagcgactgcgagatcccctgcag
gccggtaacccgttcgcctggtacctcggccaaggccgcatcatcgccggcgacgtcgac
ctgatgaccggcgccgtgttcggcgcctggcaggacgacgtcctcgccggcaagcagtcc
gtgatgctcgcacaacggaacgagaccgtggccgagctcaacggccgcgcacaggcgttc
cgcatgagcgacggcaccgtcaccggccgcgccagagcccacctccgcgacggactcagc
gcgcacaggggcgacctcatcgtcagccgcgtcaactcccacgagctccgcaccgatcgc
ggccgcgaccgcgtgaagaacggcgaccggtggagcgtcgaccaggtcctccgcgacgga
tccctcgccgtgacccacctcggccacggcggacgcgtcgtcctgccggccgaatacgtc
gccagcagcgtcgagctcggctacgccgccaccgtccaccgcgcccagggcctcaccgcg
gacacctcccacgtcctcgccgacagctctacgacacgcgccatggcctacgtggccatg
acccggggcaaggagtcgaaccgcctctacgttgaggcgaacgacgcgcagacgatgggc
gacgtcctcgagcagattgccaacaactccaacggcatgctcagcgcgcatgagaccatc
cgtgccgagcagacccgcgtcggagatctcgtcacgctggtcgaccagtaccaggacgtc
gccgagcgcgccgacgccacccggttcgagcgcatcgcccggcaggccgtcggccgccgc
atcgctcgcgagctcctcgccgacgaggcgtggggcgcactcgaatccgccctccgccgc
gccgagcgcggcggctacgacccggtcgacgccctgtaccaggcgtgggagaaggacacg
ctcgacaacgcccgcaacaagccggccgtgctcgcctcccgcgtcgacgtcgacgtgcgc
gcctacaccaacgccttcccgccggagccgcgcgaggaagccgtgccaacctggatcgcc
gatcgcgcacccatccactcccggcacaccgaccctgcgtggcgggcacacctcgccgaa
cggtacgactacctcgccgcccgcctcgaggagcgcggcgacaccctcgccgctgaacag
ccggcatgggcaaaggatctcggcgccgtgcccgaggacgagcggcgcgcggactggacc
cgccttgcggcagaggtcgacctgttccggcgccggtacggcatcgacgagagggagctc
gacgcggtgcccgtcgcatgccgcgagaagacgctcggtgccgagctgcagagccgcgtg
acggacctccacaaggcgactgcgctccggcagcgggccgcagcggcgccgctcacactt
gccgacaggctccgcgagcagaagcgggtcgaggccgaagcccgccttgagcagctccgg
agggccggcctcatcgcccgcgcaaagagctgcgacaccatcgacccggagtacccgtcc
cgtgacaaagatggtgcccgaggggatgacggccgcgagttctag
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